Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g3731 ATGAGGAAGCGGCAAGTGGTTGTAAGAAGAGAGGAGCCGGTGAGGAGCGTGAGGAGCGTGAAGTACGGGGAGTGCCAGAAGAATCACGCGGCGAACGTGGGCGGTTATGCCGTTGATGGATGCCGGGAGTTCATGGCGAGCGGCGAGGAAGGCACAAGTGGTGCCTTGACCTGTGCTGCCTGTGGCTGCCATAGAAACTTCCACAAGAGAGAGGTTGAGACTGAAGTTGTGTGTGAGTGCTCTTCACCTCCCTCTAATAATGCCACCTAG 270 0.563 MRKRQVVVRREEPVRSVRSVKYGECQKNHAANVGGYAVDGCREFMASGEEGTSGALTCAACGCHRNFHKREVETEVVCECSSPPSNNAT* 90
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g3731 89 Pfam ZF-HD protein dimerisation region 20 72 IPR006456 -
Aev05g3731 89 TIGRFAM ZF_HD_prot_N: ZF-HD homeobox protein Cys/His-rich dimerization domain 21 72 IPR006456 -
Aev05g3731 89 PANTHER BNAA09G44460D PROTEIN 15 83 - -
Aev05g3731 89 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 2 15 83 - -
Aev05g3731 89 ProSiteProfiles Zinc-finger ZF-HD dimerization-type profile. 22 71 IPR006456 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g3731 Aev-Chr5 36002871 36003140 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev05g3731 1 86 Zinc finger-homeobox gene family AT3G28917 70.408 8.45e-43 133
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF zf-HD Aev05g3731 ZF-HD_dimer 2.2e-30 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g3731 - - aprc:113868039 149.828