Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g3730 ATGGGAAGACCACCGTGTTGTGATAAAGAAGGTGTGAAGAAAGGACCATGGACTCCTGAAGAAGACATTGTTTTGGTGTCTTATATACAAGACCATGGCCCTGGCAATTGGAAGGCTGTTCCCTCCAATACTGGTTTGTTAAGGTGCAGCAAGAGCTGTAGACTTAGATGGACTAATTACTTGAGGCCAGGAATCAAGAGGGGTAATTTCACAGACCAAGAGGAGAAGATGATCATCCACCTTCAAGCTCTTTTAGGGAACAGATGGGCTGCCATAGCTTCATACCTTCCACACAGAACAGACAATGACATAAAAAACTACTGGAACACATATCTCAAAAAGAAGCTCAACAAATTGGAAGCATCATGTGTTGGTGGTGGCGCCACCGAAGCAACAACTTTATCACCGCCGCCTCTGCCTCGTGGCCAGTGGGAAAAGAGGCTCCAAACTGATATCGAAATGGCAAAAAGAGCTCTCACTGAAGCACTCTCACCACACAAAACATCCTTATTCCCCCAACCCAAAATCTCCAACAACAATAACAATAACGCTAATGTTACCACCAAACCAAAAACACAATCTTCACTATGCTATGCATCAAGTGCTGACAACATTGCTCGGATGCTTAAAGGATGGGCCAAAAACCCACCAAATAAGGCATCTTCAATTTCATCACGTGCTAATTCATCTCTCACCCAGAATTCATTCAATAACAACTTTGCTGCTGCTTCAGGTGCTGACACTGCTTCTAGCAAATTTGAAGCCTTGTTCGGTTATGACTCTAATTTGGACTCTTCAAATAATTCCGAGTTCTCTCAATGTTTTTCCCCTGAGGCTACTAATACTCTCTTCCAAGAGGAGACCAAGCCTCATATACCTTTGTACTTGCTTGAGAAGTGGCTTCTAGATGACACTGCTTGCACTGACAAACTTGCATATTCTGCAGATGCCACTGTTTTTTAG 963 0.4341 MGRPPCCDKEGVKKGPWTPEEDIVLVSYIQDHGPGNWKAVPSNTGLLRCSKSCRLRWTNYLRPGIKRGNFTDQEEKMIIHLQALLGNRWAAIASYLPHRTDNDIKNYWNTYLKKKLNKLEASCVGGGATEATTLSPPPLPRGQWEKRLQTDIEMAKRALTEALSPHKTSLFPQPKISNNNNNNANVTTKPKTQSSLCYASSADNIARMLKGWAKNPPNKASSISSRANSSLTQNSFNNNFAAASGADTASSKFEALFGYDSNLDSSNNSEFSQCFSPEATNTLFQEETKPHIPLYLLEKWLLDDTACTDKLAYSADATVF* 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g3730 320 CDD SANT 69 112 IPR001005 -
Aev05g3730 320 SMART sant 13 63 IPR001005 -
Aev05g3730 320 SMART sant 66 114 IPR001005 -
Aev05g3730 320 PANTHER TRANSCRIPTION FACTOR MYB-HB-LIKE FAMILY-RELATED 1 313 - -
Aev05g3730 320 CDD SANT 16 61 IPR001005 -
Aev05g3730 320 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Aev05g3730 320 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Aev05g3730 320 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Aev05g3730 320 Pfam Myb-like DNA-binding domain 67 112 IPR001005 -
Aev05g3730 320 Gene3D - 69 123 - -
Aev05g3730 320 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Aev05g3730 320 Gene3D - 13 66 - -
Aev05g3730 320 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Aev05g3730 320 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 313 - -
Aev05g3730 320 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g3730 Aev-Chr5 35987981 35989136 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev05g3730 1 306 MYB Transcription Factor Family AT5G62470 48.718 1.23e-95 285
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Aev05g3730 Myb_DNA-binding 7.7e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g3730 K09422 - gmx:778080 412.535
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev05g3730 05 35987981 35989136 Aev06g3778 06 37854059 37855302 PCT