Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g3729 ATGGAGGAAAGGAATGAAATGGATAAGAACATTGATGATGAGATGATGCCAGGTTTCAGGTTTCACCCCACAGATGAGGAGATTGTAGATTTTTACCTCAAGAGAAAAATTCAGCAGAAATCTCTTCCTATTGAACTTATCAAGCAAGTTGATATCTACAAGTATGAACCTTGGGATCTTCCAAAGCTTGCAAGTAGTGGGGAGAAAGAGTGGTATTTCTACTGTCCAAGGGACAGGAAGTACAGAAACAGTGCACGACCAAACAGAGTGACAAGAGCAGGGTTTTGGAAGGCCACTGGAACTGATAGGCCTATTTACTCCTCAGAGGGAAAATGCATCGGCTTGAAGAAATCTCTTGTTTTCTACAGAGGCAGAGCAGCCAAAGGGATGAAAACTGATTGGATGATGCATGAATTTCGGTTACCTTGTTTATCAGACTCAGCACATCCCAAGAAATTCTCAGATAAAAGCATCCCTGCAAGTGATTCATGGGCAATATGCAGGATATTCAAGAAAACGAATTCAATGTCCATGGCACAGAAAGCTCTGTCTCACCCTTGGATCTCTCAGTTACCAGGAACATTGGTATCTGACATGATCACACAAGGTGGTGCAAACTGCAATAACCAATTCTGCTCAGAGAACATATCTTGCACAACAGAAATAGCATCACCATCAGCCATCCAATTCTGTGGCAACACAGATTACTTGTCAGATATTCCCTCTTCTTATAGACCAATCATCAATAGCATAAGCACAGTTCCAAAGCCCTCATCACAGAATCCTGTTTCAGATAATAATGGAGCCCTTTCTGACAACTTCATCAGCTCCATGTTTTCCAGCCCTGACTGCATTGGATTTGAAGAGCCAGGCCAGAATAATCAGTATAGTGGATTCTCAGTTAGTGTACAACAGGACTTGGCCGCCACAGATCATAATGTCGTTGAAGAACAAGGGTGGAGGAGCAACACTACTTGTCCTATTGGTTTTCCCTTCAGTTTGCCGCCAAATGATGCATCATGGGACTCATCACCCCCTTGCCCCACTCAGATGTCTACCACCTATTCCACCAATAAATGTTATACTTAG 1089 0.4288 MEERNEMDKNIDDEMMPGFRFHPTDEEIVDFYLKRKIQQKSLPIELIKQVDIYKYEPWDLPKLASSGEKEWYFYCPRDRKYRNSARPNRVTRAGFWKATGTDRPIYSSEGKCIGLKKSLVFYRGRAAKGMKTDWMMHEFRLPCLSDSAHPKKFSDKSIPASDSWAICRIFKKTNSMSMAQKALSHPWISQLPGTLVSDMITQGGANCNNQFCSENISCTTEIASPSAIQFCGNTDYLSDIPSSYRPIINSISTVPKPSSQNPVSDNNGALSDNFISSMFSSPDCIGFEEPGQNNQYSGFSVSVQQDLAATDHNVVEEQGWRSNTTCPIGFPFSLPPNDASWDSSPPCPTQMSTTYSTNKCYT* 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g3729 362 ProSiteProfiles NAC domain profile. 15 172 IPR003441 GO:0003677|GO:0006355
Aev05g3729 362 SUPERFAMILY NAC domain 14 172 IPR036093 GO:0003677|GO:0006355
Aev05g3729 362 PANTHER NAC DOMAIN-CONTAINING PROTEIN 94-RELATED 1 360 - -
Aev05g3729 362 Pfam No apical meristem (NAM) protein 17 141 IPR003441 GO:0003677|GO:0006355
Aev05g3729 362 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 1 360 - -
Aev05g3729 362 Gene3D NAC domain 24 177 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g3729 Aev-Chr5 35979265 35981217 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev05g3729 2 216 NAC Transcription Factor Family AT1G26870 63.594 1.42e-96 291
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Aev05g3729 NAM 3.3e-37 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g3729 - - gmx:100778120 470.7