Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g3718 ATGTCAAGCAGAAGGTCCAGCAGGCAGCAATCAGGGTCTACAAGGATCTCAGATGACCAAATCATCGAGCTTGTTTCAAAGTTGCGCCAACTCGTTCCTGAGATTCGTGATAGGCGCTCTGACAAGGTATCAGCATCGAAGGTCCTACAAGAGACCTGCAACTATATCAGAAGCTTACACAGAGAGGTTGATGACTTAAGCGAACGGCTGTCTCAGTTGTTGGCCACCATTGATGCCGATAGTGCTGAGGCTGCCATCATTAGGAGCCTAATTAACCAATGA 282 0.4787 MSSRRSSRQQSGSTRISDDQIIELVSKLRQLVPEIRDRRSDKVSASKVLQETCNYIRSLHREVDDLSERLSQLLATIDADSAEAAIIRSLINQ* 94
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g3718 93 Pfam Helix-loop-helix DNA-binding domain 23 60 IPR011598 GO:0046983
Aev05g3718 93 PANTHER TRANSCRIPTION REGULATOR 1 91 - -
Aev05g3718 93 Coils Coil 56 83 - -
Aev05g3718 93 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 21 78 IPR036638 GO:0046983
Aev05g3718 93 PANTHER TRANSCRIPTION FACTOR PRE 1 91 IPR044293 GO:0006355|GO:0040008|GO:0046983
Aev05g3718 93 Gene3D - 2 88 IPR036638 GO:0046983
Aev05g3718 93 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 5 59 IPR011598 GO:0046983
Aev05g3718 93 CDD bHLH_AtPRE_like 15 76 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g3718 Aev-Chr5 35892529 35894765 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev05g3718 13 91 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G39860 73.750 4.63e-36 115
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Aev05g3718 HLH 3.8e-05 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g3718 - - gmx:100794486 156.762