Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g3714 ATGGCCTTTCCTCCTTCTCACTCGTTCATGTTCCACCATCATGAAGACCTTCAGCTTCGTTCAACTAATTCTCCCCCCTCTCTCAACAACAACGCCTTCCCCTCTCTCCCTCCCCAACACTACTTTCAAGGAGGTGGTGCTTCATTGATGATGAAGAGATCCATGTCATTCTCAGGCGTAGAGACTAACAACAACAAGTGCGAGGATTCAGTACTAGTACTACACGGGGGCGGCGGAGGCGAGGACGAGTTATCGGACGAGGGATCGCAGATTGGGGAGCTGAAGAAGAAGAGGCTGAACTTGGAGCAAGTGAAAGCTCTGGAGAAGAGCTTCGAGGTGGGCAACAAGCTGGAGCCTGAGCGCAAGTTGCAGCTGGCAAAGGCGTTGGGGCTTCAGCCGAGGCAGATCGCCATCTGGTTCCAGAATCGGAGGGCGCGGTGGAAGACCAAGCAGCTCGAGAGGGAGTATGACCTCCTCAAGAAGCACTTTGATGCTCTTAAGGCTGACAACGACACTCTTAAGACTCAGAACCACAAACTCCACGCAGAGCTACAAGCTCTAAAGAATAGGGAATGTTGTGAAACTGGAACAATAATGAGCCTAAAGAAAGAAACGGAGGGATCTTGGAGCAACAATGGAAGTGATAATAGCTCAGATATTAACTTGGATCTATCAAGAACACCGGTGATGAACAGCCCTGTATCTTCTTCCCATCACAATAATAATAATGGTAAGAACCTCTTACCAAATTCCCTAAAGCCAAACGGCATCACACAGCTCCTCCAATGCTCATCATCAAGATCAGATCCTCAAGATGAAACCTTGTGCAACATGTTCCACAACATCGATGACCACCAGAATTTTTGGCCCTGGCCTGCAGAGCACCACCATTTTCATTGA 900 0.4878 MAFPPSHSFMFHHHEDLQLRSTNSPPSLNNNAFPSLPPQHYFQGGGASLMMKRSMSFSGVETNNNKCEDSVLVLHGGGGGEDELSDEGSQIGELKKKRLNLEQVKALEKSFEVGNKLEPERKLQLAKALGLQPRQIAIWFQNRRARWKTKQLEREYDLLKKHFDALKADNDTLKTQNHKLHAELQALKNRECCETGTIMSLKKETEGSWSNNGSDNSSDINLDLSRTPVMNSPVSSSHHNNNNGKNLLPNSLKPNGITQLLQCSSSRSDPQDETLCNMFHNIDDHQNFWPWPAEHHHFH* 300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g3714 299 ProSiteProfiles 'Homeobox' domain profile. 90 150 IPR001356 GO:0003677
Aev05g3714 299 Pfam Homeodomain 96 148 IPR001356 GO:0003677
Aev05g3714 299 Gene3D - 88 157 - -
Aev05g3714 299 PANTHER HOMEOBOX ASSOCIATED LEUCINE ZIPPER PROTEIN 1 298 - -
Aev05g3714 299 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN 1 298 IPR045224 GO:0003700
Aev05g3714 299 SUPERFAMILY Homeodomain-like 95 152 IPR009057 -
Aev05g3714 299 CDD homeodomain 95 151 IPR001356 GO:0003677
Aev05g3714 299 Coils Coil 149 190 - -
Aev05g3714 299 MobiDBLite consensus disorder prediction 204 253 - -
Aev05g3714 299 PRINTS Lambda-repressor HTH signature 130 146 IPR000047 GO:0003677
Aev05g3714 299 PRINTS Lambda-repressor HTH signature 121 130 IPR000047 GO:0003677
Aev05g3714 299 SMART HOX_1 92 154 IPR001356 GO:0003677
Aev05g3714 299 Pfam Homeobox associated leucine zipper 150 190 IPR003106 GO:0006355|GO:0043565
Aev05g3714 299 ProSitePatterns 'Homeobox' domain signature. 125 148 IPR017970 GO:0000981|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g3714 Aev-Chr5 35856795 35858430 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev05g3714 1 291 Homeobox Transcription Factor Family AT3G01220 51.316 1.73e-79 241
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Aev05g3714 Homeodomain 3.3e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g3714 K09338 - gmx:100790803 359.762