Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g3707 ATGGCAGCTTGCATATTCACTGTGTCACAAAACGGAACCGGTGATTTCAGAACGGTGCAGGAAGCAATCGACGCCGTGCCACTCGGCAACAATCGCCGGACGGTGATTCGGGTGTCGCCGGGAATCTACCGGCAGCCGGTGTATGTTCCAAAGACGAAGAATTTCATCACGATTGCTGGGCTGTGCCCTGAGGACACTGTGCTTACCTGGAACAACACTGCCGCCAACATCGATCATCACCAACCTGCTAGAGTGATAGGGACTGGGACGTTTGGTTGTGGAAGTACCATTGTGGAAGGGGAGGACTTCATTGCTGAAAACATTACTTTTGAGAATTCTGCCCCTCAGGGTTCAGGGCAAGCAGTGGCAATTAGAGTAACAGCAGATCGGTGCGCCTTCTACAATTGCAGGTTCCTTGGATGGCAGGACACACTGTACTTGCATTACGGCAAACAATATTTAAAAGATTGCTATGTTGAAGGAAGTGTGGACTTCATCTTTGGCAATAGCACTGCTCTTTTGGAGCACTGTCATATCCATTGCAAGTCTGAAGGGTTCATAACTGCACAAAGCAGAAAATCTTCGCAGGAAACAACTGGTTATGTATTCTTGAGATGTGTTATCACAGGTAATGGAGGAAATTCGTATGCATATCTTGGACGGCCGTGGGGACCTTTTGGAAGGGTGGTCTTTGCATACACTTACATAGATCAATGTATAAAGCATGTTGGCTGGGATAACTGGGGGAAGGTTGAGAATGAGAGAAGTGCTTGCTTTTATGAATACAGGTGTTTTGGACCTGGTTGCTGTCCATCCAAACGAGTAACATGGTGTAGAGAATTGATTGATGAAGAAGCAGAGCAGTTCCTCATGCATCCTTTCATTGATCCTGATCCAGAGAGGCCTTGGCTTGCTCAAAGAATGGCCTTGAGGATTCCATATTCCGCTTAG 951 0.4711 MAACIFTVSQNGTGDFRTVQEAIDAVPLGNNRRTVIRVSPGIYRQPVYVPKTKNFITIAGLCPEDTVLTWNNTAANIDHHQPARVIGTGTFGCGSTIVEGEDFIAENITFENSAPQGSGQAVAIRVTADRCAFYNCRFLGWQDTLYLHYGKQYLKDCYVEGSVDFIFGNSTALLEHCHIHCKSEGFITAQSRKSSQETTGYVFLRCVITGNGGNSYAYLGRPWGPFGRVVFAYTYIDQCIKHVGWDNWGKVENERSACFYEYRCFGPGCCPSKRVTWCRELIDEEAEQFLMHPFIDPDPERPWLAQRMALRIPYSA* 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g3707 316 ProSitePatterns Pectinesterase signature 2. 159 168 IPR033131 -
Aev05g3707 316 Gene3D - 3 310 IPR012334 -
Aev05g3707 316 PANTHER PECTINESTERASE 1 315 - -
Aev05g3707 316 Pfam Pectinesterase 7 296 IPR000070 GO:0030599|GO:0042545
Aev05g3707 316 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 1 315 - -
Aev05g3707 316 SUPERFAMILY Pectin lyase-like 3 302 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g3707 Aev-Chr5 35823716 35826484 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev05g3707 5 309 Carbohydrate Esterase AT5G47500 39.365 4.39e-73 228
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g3707 K01051 - gmx:100786786 639.802