Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g3704 ATGGAAATGGTGATAAAGAGTGAAGAGAACATGAAAAGGAGTTTGATTTCCATTCCTGAGAGCGAGTTCATAGTGGCAAGGGGTGCCAAGAGAAGACGGAGAGAGCCTAATAGTGCAGTTTCACTAACAACTGAAGATGATGATGATCAAAGTCATAAGCAACAAGGTGATCAAAAGTCTGCTTCAAACAGCAGTACTCCTACTGCTACAAAGAGGAGCTCAAGATTCAGGGGTGTTAGCAGACATAGATGGACTGGTAGATTTGAAGCTCACTTATGGGACAAGCTTTCTTGGAACATAACACAAAAGAAGAAAGGGAAGCAAGGGGCATACGATGAAGAAGAATCTGCGGCTAGAGCATATGATTTAGCTGCACTTAAATATTGGGGAACATCAACTTTCACCAACTTCCCGATCTCAGATTATGATAAAGAGATAGAGATCATGCAGACTATGACAAAAGAGGAGTACTTGGCCACTTTAAGGAGAAAGAGTAGTGGCTTCTCCAGAGGTGTATCAAAGTATAGGGGTGTTGCAAGACACCACCACAATGGCAGATGGGAAGCAAGGATAGGGAGAGTTTTTGGAAATAAATATCTCTACCTAGGCACCTACAGCACCCAAGAAGAAGCTGCGCGTGCTTATGACATAGCAGCCATTGAGTACAGAGGGATCCATGCAGTAACCAACTTTGATTTGAGCACTTACATAAGATGGTTAAAGCCTTCAGAAGGAAACAACCCCTCATCAGAAGCAAAACTTGATTCAGAGTCTCATAAAGTGGCACCTAAATCTAACAACTACACTCCAATAGAGAGCTCCAAACCATTTTCAGATTATTATCTTAATTTTCCTCAAAACCATGAAACATTATTTGACACAAAAGCATACCAAATCTCCAGCACTAAGTCCTCCTCCTCCTCCTCATCTTCTCCGACGGCGCTCGGCCTCCTATTCCGGTCGTCGATATTTAGAGAATTGGTTGAGAAGAATCTGCACATGCCTGGAGATGAAACTGATGGGGAAGACACAAAGGATCAACAGCAGCCACAGGTAGCATGTGATGATGATGAGGAGGATGAGTTGAGTGGCATTTTCTATGATGGAATTGGTGACATCCCTTTTCTGTGA 1131 0.4288 MEMVIKSEENMKRSLISIPESEFIVARGAKRRRREPNSAVSLTTEDDDDQSHKQQGDQKSASNSSTPTATKRSSRFRGVSRHRWTGRFEAHLWDKLSWNITQKKKGKQGAYDEEESAARAYDLAALKYWGTSTFTNFPISDYDKEIEIMQTMTKEEYLATLRRKSSGFSRGVSKYRGVARHHHNGRWEARIGRVFGNKYLYLGTYSTQEEAARAYDIAAIEYRGIHAVTNFDLSTYIRWLKPSEGNNPSSEAKLDSESHKVAPKSNNYTPIESSKPFSDYYLNFPQNHETLFDTKAYQISSTKSSSSSSSSPTALGLLFRSSIFRELVEKNLHMPGDETDGEDTKDQQQPQVACDDDEEDELSGIFYDGIGDIPFL* 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g3704 376 Pfam AP2 domain 173 224 IPR001471 GO:0003700|GO:0006355
Aev05g3704 376 Pfam AP2 domain 74 130 IPR001471 GO:0003700|GO:0006355
Aev05g3704 376 PRINTS Ethylene responsive element binding protein signature 214 234 IPR001471 GO:0003700|GO:0006355
Aev05g3704 376 PRINTS Ethylene responsive element binding protein signature 76 87 IPR001471 GO:0003700|GO:0006355
Aev05g3704 376 ProSiteProfiles AP2/ERF domain profile. 174 232 IPR001471 GO:0003700|GO:0006355
Aev05g3704 376 MobiDBLite consensus disorder prediction 1 20 - -
Aev05g3704 376 MobiDBLite consensus disorder prediction 1 15 - -
Aev05g3704 376 MobiDBLite consensus disorder prediction 247 269 - -
Aev05g3704 376 SUPERFAMILY DNA-binding domain 173 234 IPR016177 GO:0003677
Aev05g3704 376 ProSiteProfiles AP2/ERF domain profile. 75 138 IPR001471 GO:0003700|GO:0006355
Aev05g3704 376 MobiDBLite consensus disorder prediction 26 78 - -
Aev05g3704 376 CDD AP2 74 140 IPR001471 GO:0003700|GO:0006355
Aev05g3704 376 Gene3D AP2/ERF domain 74 140 IPR036955 GO:0003700|GO:0006355
Aev05g3704 376 Gene3D AP2/ERF domain 173 234 IPR036955 GO:0003700|GO:0006355
Aev05g3704 376 MobiDBLite consensus disorder prediction 333 360 - -
Aev05g3704 376 CDD AP2 173 234 IPR001471 GO:0003700|GO:0006355
Aev05g3704 376 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 5 354 - -
Aev05g3704 376 PANTHER BINDING PROTEIN, PUTATIVE-RELATED 5 354 - -
Aev05g3704 376 SMART rav1_2 174 238 IPR001471 GO:0003700|GO:0006355
Aev05g3704 376 SMART rav1_2 75 144 IPR001471 GO:0003700|GO:0006355
Aev05g3704 376 MobiDBLite consensus disorder prediction 333 352 - -
Aev05g3704 376 MobiDBLite consensus disorder prediction 26 55 - -
Aev05g3704 376 MobiDBLite consensus disorder prediction 56 74 - -
Aev05g3704 376 SUPERFAMILY DNA-binding domain 74 140 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g3704 Aev-Chr5 35788260 35790694 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev05g3704 52 236 AP2-EREBP Transcription Factor Family AT5G57390 63.590 3.79e-81 253
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-AP2 Aev05g3704 AP2 1.3e-09 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g3704 - - ahf:112716370 515.768