Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g3677 ATGGGAAGGCCTCCTTGCTGTGACAAGTCCAATGTGAAAAGGGGTCTTTGGACCCCTGAGGAAGATGCCAAAATACTTGCCTATGTCTCCAATCATGGAATTGGAAATTGGACTTTGGTTCCAAAGAAAGCAGGGCTGAACAGGTGTGGTAAGAGCTGCAGATTAAGATGGACCAACTACCTAAGACCTGATCTTAAGCATGACAGTTTCACTCCACAAGAAGAGGAGCTCATTATTAACCTTCATGCAGCTATAGGAAGCAGGTATGTTTGGAGAATTTCTTGCATAGCCTCAGTTTAA 300 0.44 MGRPPCCDKSNVKRGLWTPEEDAKILAYVSNHGIGNWTLVPKKAGLNRCGKSCRLRWTNYLRPDLKHDSFTPQEEELIINLHAAIGSRYVWRISCIASV* 100
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g3677 99 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 65 IPR017930 -
Aev05g3677 99 PANTHER F14D16.11-RELATED 1 89 - -
Aev05g3677 99 SUPERFAMILY Homeodomain-like 16 90 IPR009057 -
Aev05g3677 99 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Aev05g3677 99 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Aev05g3677 99 CDD SANT 17 61 IPR001005 -
Aev05g3677 99 Gene3D - 6 67 - -
Aev05g3677 99 SMART sant 13 63 IPR001005 -
Aev05g3677 99 PANTHER F14D16.11-RELATED 1 89 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g3677 Aev-Chr5 35605517 35606127 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev05g3677 1 89 MYB Transcription Factor Family AT3G28470 85.393 6.17e-56 174
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Aev05g3677 Myb_DNA-binding 7.2e-17 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g3677 K09422 - gmx:100815077 186.808