Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g3650 ATGCTTAACCATTCTAAACGTTCTGCTTTCGTTCCTGTTTCCACTTCTACTCTTATGTTGAGGAAGGGTGTTGTTTCACCTCCTCCCCAGCCCATGACGCTTGACCTTTTTGGTGGAGTCTTGACCCCTTCTTTGGGTCAGTCTTCCTTTCTTCATCGGGCCATTCCTTCAAATGGTCAATTTATTAAAAAATTTAGCAACCCTGCTGATGTTAATTTTGCACCGAAAAACATTAATGCTTCTTCACATAACCCCGAAAACAAGGTCTACAACACTGGTAGTGCCAAACTCATATTGAATTTTGCTCAAAAAATTGCAGTTATTCCAACTCAATTTGCGAATACTGTTGTTGCTTCTTCGTCGCACCCTCCTACTCCACCACCACTGGTTTCAAATGGTGGAGTTGGGTCGATGCTAAAGCTAAGGATGCAGGATAACCTTGCACGTCACATAAAAAAGAGCAATCAACAGGCTAATGGTATTAGTATGTTGAGGAGGCTAACTAAGTGGACAAACACACGAAATGTTGGCAGAGACCCTGAAGGCATCATTAACGGGCAATGGACACCGGACGAGGATAGAATTCTCAAGGAATTAGTGACCCAGTATGGGGAGAAGAAATGGTCCAAAATTGCAATGTTACTTAAGGGTAGGATTGCTAAACAATGCAGGGAGAGATGGTACAACCATGTCCAACCAAACATTAAGAAGGGGCCATGGACTCTGGAGGAAGACATATTGTTGATCAACGCGCACAAGGAATTTGGGAACAAGTGGGCAAAGATTGCGAAGAAAATACCTGGTAGGAGCGAGAACACCATTAAGAACCGTTGGAATGGCACCAAGAGGAGCAAGAACATAAAAGGATACACCAAGAACAACAACGGTGATGAATACTATGATGCATTGCTCCGAGCCTACATCAAAGATGTCGCGTTAGCAACAGCGACAAAGAAGAAGCAACAACATCAACATCAGACGGAGGAGAAGGAGATGGAGAAGAAGAAGAAGAAGAAAAATAAAGTACTCCCAAACATGAGCATTGGTAAGGATAAGGCTCCTATGTTCAGTGACTTATGCAATACTAGTGATGGTCTCGATCTTTCGCTTCGCATTGGGTTCCCAAACCCATGA 1134 0.433 MLNHSKRSAFVPVSTSTLMLRKGVVSPPPQPMTLDLFGGVLTPSLGQSSFLHRAIPSNGQFIKKFSNPADVNFAPKNINASSHNPENKVYNTGSAKLILNFAQKIAVIPTQFANTVVASSSHPPTPPPLVSNGGVGSMLKLRMQDNLARHIKKSNQQANGISMLRRLTKWTNTRNVGRDPEGIINGQWTPDEDRILKELVTQYGEKKWSKIAMLLKGRIAKQCRERWYNHVQPNIKKGPWTLEEDILLINAHKEFGNKWAKIAKKIPGRSENTIKNRWNGTKRSKNIKGYTKNNNGDEYYDALLRAYIKDVALATATKKKQQHQHQTEEKEMEKKKKKKNKVLPNMSIGKDKAPMFSDLCNTSDGLDLSLRIGFPNP* 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g3650 377 ProSiteProfiles Myb-like domain profile. 186 231 IPR001005 -
Aev05g3650 377 Gene3D - 181 236 - -
Aev05g3650 377 PANTHER MYB DOMAIN PROTEIN 100-RELATED 121 340 - -
Aev05g3650 377 Coils Coil 313 340 - -
Aev05g3650 377 MobiDBLite consensus disorder prediction 318 349 - -
Aev05g3650 377 MobiDBLite consensus disorder prediction 321 338 - -
Aev05g3650 377 PANTHER MYB PROTEIN-RELATED 121 340 - -
Aev05g3650 377 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 186 235 IPR017930 -
Aev05g3650 377 SUPERFAMILY Homeodomain-like 183 278 IPR009057 -
Aev05g3650 377 SMART sant 184 233 IPR001005 -
Aev05g3650 377 SMART sant 236 284 IPR001005 -
Aev05g3650 377 CDD SANT 239 279 IPR001005 -
Aev05g3650 377 Gene3D - 239 281 - -
Aev05g3650 377 CDD SANT 188 231 IPR001005 -
Aev05g3650 377 Pfam Myb-like DNA-binding domain 188 248 - -
Aev05g3650 377 ProSiteProfiles Myb-like domain profile. 232 282 IPR001005 -
Aev05g3650 377 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 236 286 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g3650 Aev-Chr5 35424776 35426948 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev05g3650 183 314 MYB Transcription Factor Family AT4G18770 53.383 2.80e-43 154
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Aev05g3650 Myb_DNA-bind_6 8.5e-18 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g3650 K09422 - gsj:114405432 202.986