Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g3649 ATGGAGTTCGATCCCGAATTCCTCCATGGCCAACTCCAATCCCCAAATGTTTCCACATTTTTTTCGAACAATCCAACCTCACCACAACCGAACAACCCTTTAGTCCAGCCCAACGACACTACCTCTGTCATGAATGCGTTTGACCACTCTCAAAGCTTTGATTACATTCCTGTTTTCGCTTCACCTTTTTATGGTGACTCAACTCATTGTTCGGGTCAACATTGTTTTATTGAACAAATTATTCCTTCAAATGAGCAATTTATACAAGATTTCATCGAACCTGCTAATATCAATTTTACATCGAAAAATATTAACGCTTCGTCACATGACCCTCAAAACAGCATCCTCAACACCGTTAGTACCAAATTACTACCGGATTTTACTGAGAAAATAACTGGTATTCCAACTCAATTTGGGAGCTCTGCTGCTTCTTCATCTCACCCTCCTACTCCACCACCATCGGTTTCTAACGGTGGATCTGGATCGATGCTAAAGCTAAAGATAGATGAGAATCTTGCAAGTCTGATCAAAAAGAACATTCGACGAGCTAATGGTAGTAGTCAGACGAGCAAGAGGGCAAAGACACAAAAAGATGACAAAAGTTCTGCTGATACTAAGGGACAATGGACATCTGATGAGGATAGGATTCTCAAGGAATTTGTAGACAAGCATGGAGAGAAGAAATGGTCCAAAATTGCAAAGTTACTCAAGAACAGGATTGGAAAACAATGTAGGGAGAGATGGTACAATCATCTCCAACCAAACATTAAGAAGGGGGCATGGACTCTGGAGGAAGACATAATGTTGATCAATGCGCACAAGGAATTTGGTAACAAGTGGGCAAAGATTGCGAAGAAAATACCCGGCAGGAGCGAGAACACCGTCAAGAACCGTTGGAACACAGTCAAGAGGAGCAAGAACATAAAGGTGCACAACAACAACATCGATGAATATGATGATTCAGTGCTTCAAGCCTACATCAAAGATGTCACAACCTCATCAACAACTAGTTCTAAAGACAAAAAAGCAACAACGTCATCAAAAAAGAAGAAGAAGGAGGAGGAAAAGAAGAATGAAGACCTAATTGCAATTAACAAGGATAAGGGTAAGGCCCCTATGTTTAGTGGCTTATGCAACACTGATCTTGGTCTTGCGCTTCATATGGAGTTCCCAACCCCTGACTTTGGCAAAGAAGAGTTTGTTGTTCCTACCCGTGCAGGGTAA 1224 0.415 MEFDPEFLHGQLQSPNVSTFFSNNPTSPQPNNPLVQPNDTTSVMNAFDHSQSFDYIPVFASPFYGDSTHCSGQHCFIEQIIPSNEQFIQDFIEPANINFTSKNINASSHDPQNSILNTVSTKLLPDFTEKITGIPTQFGSSAASSSHPPTPPPSVSNGGSGSMLKLKIDENLASLIKKNIRRANGSSQTSKRAKTQKDDKSSADTKGQWTSDEDRILKEFVDKHGEKKWSKIAKLLKNRIGKQCRERWYNHLQPNIKKGAWTLEEDIMLINAHKEFGNKWAKIAKKIPGRSENTVKNRWNTVKRSKNIKVHNNNIDEYDDSVLQAYIKDVTTSSTTSSKDKKATTSSKKKKKEEEKKNEDLIAINKDKGKAPMFSGLCNTDLGLALHMEFPTPDFGKEEFVVPTRAG* 408
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g3649 407 MobiDBLite consensus disorder prediction 179 209 - -
Aev05g3649 407 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 257 307 IPR017930 -
Aev05g3649 407 Gene3D - 260 322 - -
Aev05g3649 407 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 206 256 IPR017930 -
Aev05g3649 407 SMART sant 205 254 IPR001005 -
Aev05g3649 407 SMART sant 257 305 IPR001005 -
Aev05g3649 407 ProSiteProfiles Myb-like domain profile. 201 252 IPR001005 -
Aev05g3649 407 MobiDBLite consensus disorder prediction 192 209 - -
Aev05g3649 407 SUPERFAMILY Homeodomain-like 206 299 IPR009057 -
Aev05g3649 407 MobiDBLite consensus disorder prediction 334 359 - -
Aev05g3649 407 MobiDBLite consensus disorder prediction 136 163 - -
Aev05g3649 407 CDD SANT 260 303 IPR001005 -
Aev05g3649 407 PANTHER MYB DOMAIN PROTEIN 100-RELATED 132 353 - -
Aev05g3649 407 Gene3D - 198 257 - -
Aev05g3649 407 PANTHER MYB PROTEIN-RELATED 132 353 - -
Aev05g3649 407 CDD SANT 209 252 IPR001005 -
Aev05g3649 407 Pfam Myb-like DNA-binding domain 209 269 - -
Aev05g3649 407 ProSiteProfiles Myb-like domain profile. 253 303 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g3649 Aev-Chr5 35419456 35421871 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev05g3649 197 350 MYB Transcription Factor Family AT4G18770 49.057 2.32e-44 157
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Aev05g3649 Myb_DNA-bind_6 1.1e-17 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g3649 K09422 - ccaj:109801641 187.193