Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g3629 ATGTACCCAAGTTGGTTTTTAGGGCATACCAATTTGAAGATGGCATGGATTCAGCATCATATCCATCAAAAAGATGGTTACTTGAGTTACCCTCCACCACCAGTTATGCCATCACCATCATCGTTCTTATCACCGCCATATTCTGGTGCTGTTTTTCACAAGGATTCAAATTCAATGTCGTCTCCAACAACCACAACTTCATCTTCATCATCATCTTCTGGTACTAGGATTAGTCCAGCTGTTCTGTTCATCATAGTGATTCTGGCTGTTCTGTTTTTCATCTCTGGACTCCTCCACCTGCTTGTTAGATTTCTCATTAAGAACCCTTCTTCATCTGCATCTGCACAATCCAACAGAAACCAAGAGATTTCTACTTCTGATGCACTACAGAGGCAATTGCAACAGCTTTTCCACCTCCATGATTCTGGCTTGGATCAGGCTTTCATTGATGCTCTTCCTGTTTTTCAGTACAAGGAGATTGTTGGGTTGAAGGAGCCATTTGATTGTGCTGTTTGCTTGTGTGAGTTTTCTGAGAAGGATAAGCTCAGGTTGTTGCCTATGTGTAGCCATGCTTTTCATATAAGTTGTATAGACACATGGCTCCTTTCGAATTCGACTTGTCCACTTTGTAGAGGGACACTCCTTACTCCTGGATTTTCGATGGAGAACCCCATGTTTGATTTTGATGATTTGAGGGAGGATGAAGGGTGCCCTTGTAATGTGGAAAATGGATTCACTAATAGGCAGAAAACGGTAGCGGTTGAAGAAATTGCTGTGGAGAAAAAAGGGGTTTTCCCTGTGAGGCTTGGTAAATTCCGAAAGCTCGATGTGGAGGCCGGGGAGATTGCGGTGGGAGAGACGAGTAGCAGTAACTTGGATGCTAGGAGGTGTTTCTCAATGGGATCTTATCAGTATGTGCTTGCCAATTCAGAACTCAGGATAGCCTTGAATCACGACCGGAGAGACCGTGATTTGAGGCTTGCCAAAGGAACTGAACATGCTGAGAGTGAGAGGCTTTCAGTGGAAGGGGATATGGAAGCAAAGACAATTAGAAGTGTGAGTAAAGGATGGGGCAGTTGGGGCAGTGTGATGGTGGGATCCATGAAAGCTGTGTGA 1116 0.4435 MYPSWFLGHTNLKMAWIQHHIHQKDGYLSYPPPPVMPSPSSFLSPPYSGAVFHKDSNSMSSPTTTTSSSSSSSGTRISPAVLFIIVILAVLFFISGLLHLLVRFLIKNPSSSASAQSNRNQEISTSDALQRQLQQLFHLHDSGLDQAFIDALPVFQYKEIVGLKEPFDCAVCLCEFSEKDKLRLLPMCSHAFHISCIDTWLLSNSTCPLCRGTLLTPGFSMENPMFDFDDLREDEGCPCNVENGFTNRQKTVAVEEIAVEKKGVFPVRLGKFRKLDVEAGEIAVGETSSSNLDARRCFSMGSYQYVLANSELRIALNHDRRDRDLRLAKGTEHAESERLSVEGDMEAKTIRSVSKGWGSWGSVMVGSMKAV* 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g3629 371 MobiDBLite consensus disorder prediction 54 75 - -
Aev05g3629 371 ProSiteProfiles Zinc finger RING-type profile. 169 211 IPR001841 -
Aev05g3629 371 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 144 216 IPR013083 -
Aev05g3629 371 PANTHER RING-H2 FINGER PROTEIN ATL46-LIKE ISOFORM X1 9 351 - -
Aev05g3629 371 SMART ring_2 169 210 IPR001841 -
Aev05g3629 371 CDD RING-H2_PA-TM-RING 168 211 - -
Aev05g3629 371 Pfam Ring finger domain 168 211 IPR001841 -
Aev05g3629 371 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RNF13-LIKE 9 351 - -
Aev05g3629 371 SUPERFAMILY RING/U-box 148 217 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g3629 Aev-Chr5 35294702 35296594 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev05g3629 66 307 C3H Transcription Factor Family AT2G18650 44.727 1.58e-55 186
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g3629 - - gmx:100806337 464.536