Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g3623 ATGTCAATTACTATGTCTGTGTCACTACTATTCATAGGGCTAGTGTTATTAGTCCTATTTCATGTTTGCATTTCTGGGGTAATCTCTAGAAGAAATGTCAGAGAATCAATGGTTGAAAGAGGTACAAGTGGTTCCATAACCATGTCAGTTGATGATTTGGAGAAGCTTCCATGCTATAATTACATTGCCAGAGACATCACAAGTAGCCCTGTGGATTGTGCAGTTTGCTTGGAGACCCTTATTACCGGTGATAAGTGCAGATTGTTGCCAATTTGCAAGCACAGTTTTCATGCACATTGTGTTGATAAATGGCTTCTTAAGACACCCTTTTGCCCAATTTGCAGATCAAGTGCTGGAAGAAGTGAAAGTGGTTTATTTATGAATGTTGGAATAGAATTGAGAGAGAATCAAAGATTAGGACAAGAAACAGATGAAAACCAAATGGTATCTGCTAATACCACTTTGTCTCAGAATATCAGAGTAGATAAACTTCCGATGGATTTTTGGAATTGGAGCAGGACTGTGTTCCCAACACCTGTTTTGCTTGCTAGCATCTTCATTTTGAATATCACTATGGAGTTTTCAACTTCTTGGGCTCTAGAGAGGCATGTTCATAAAGTTCTGAGATGCCTTGGAACACAGAATACTTATTCAGAAAATGAAACTGCAGAAGACAATATAAAGAGGGCAAGTATAAGAGATACATGGATTTTGATTGGAGCAATCATGTCGGTTATATTGATAATTGTTATTATTGCATACATCTTATATCATAGATACTTCAAGTCATCAGAACATAAAATCAAAGAAACATTTGAAGACATGTTAAAGAATACTGCTTGTCCTAGAATTTCGGTCAAGGAAGTCTATGCTGCCACTAACCATCTTAATGAAATGAATGTAATTGGGGAAGGAACTGCAGGTAAGGTCTATAAAGGCAAAATGGAAAACAATCAGCATGTTGCAGTAAAGCACATAATGAATGATGATGGAAATATGGAGACTTTTGCAAGGGAAATCACAAGCTTATCACATGTCAGACACCCGAATCTTGTTCCTTTGCTAGGTTTCTGTGTTAAGGGAGATGACTGTTTTCTTGTCTATGAACTATGTCCTAATGGAACTCTTTCAGATTGGCTATTTGGCAAGAACAAGGTCCTGTCATGGATACAGAGGCTAGAAATCGCAATTGACAGTGCTCGAGGTCTTTGGTTTCTGCACACATATCCTGGAGGTTGCATTGTTCATCGTGATATCAAGCCAACAAATATTCTTCTGGGGCCTAAGTTTGAGGCAAAGCTATCAGATTTTGGGCTGTCTAAAATTATTGAGGTTGGTGAAACCTATGTTAGCTCAGAAGTGAGAGGGACTTTTGGATATGTTGATCCTGAGTACCAAAGAAACCATCATGTGAATTCATCTGGTGATGTTTATAGCTTTGGAATGGTACTCCTACAAATCCTCTCTGGAAAGAAGGCTATAAACTTGAACCTGAAGAAACCAATGTCACTGAGTAGAATGGCAAAAGCACTCAGCAGGAATGGAAGCATAACAAAATTTGCTGATCCTAAACTTGAAGGGGAGTACTCAGAGGAAGCATTTTATTTCACACTGAAATTGGCTCTGTCATGCACAGCCTTAAACCACCAACGTCCATCCATGGAGGATGTGTTCAGAAAACTACAAGAGGCACTTTTGATTTCAAAAGAGAGGAAGGTTTCTGTTACAGAGACCCCAGTGTAG 1743 0.3878 MSITMSVSLLFIGLVLLVLFHVCISGVISRRNVRESMVERGTSGSITMSVDDLEKLPCYNYIARDITSSPVDCAVCLETLITGDKCRLLPICKHSFHAHCVDKWLLKTPFCPICRSSAGRSESGLFMNVGIELRENQRLGQETDENQMVSANTTLSQNIRVDKLPMDFWNWSRTVFPTPVLLASIFILNITMEFSTSWALERHVHKVLRCLGTQNTYSENETAEDNIKRASIRDTWILIGAIMSVILIIVIIAYILYHRYFKSSEHKIKETFEDMLKNTACPRISVKEVYAATNHLNEMNVIGEGTAGKVYKGKMENNQHVAVKHIMNDDGNMETFAREITSLSHVRHPNLVPLLGFCVKGDDCFLVYELCPNGTLSDWLFGKNKVLSWIQRLEIAIDSARGLWFLHTYPGGCIVHRDIKPTNILLGPKFEAKLSDFGLSKIIEVGETYVSSEVRGTFGYVDPEYQRNHHVNSSGDVYSFGMVLLQILSGKKAINLNLKKPMSLSRMAKALSRNGSITKFADPKLEGEYSEEAFYFTLKLALSCTALNHQRPSMEDVFRKLQEALLISKERKVSVTETPV* 581
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g3623 580 PANTHER OS01G0253100 PROTEIN 149 570 IPR045271 GO:0004714|GO:0006468
Aev05g3623 580 ProSiteProfiles Protein kinase domain profile. 296 565 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aev05g3623 580 SUPERFAMILY RING/U-box 59 118 - -
Aev05g3623 580 Pfam Ring finger domain 72 115 IPR001841 -
Aev05g3623 580 Gene3D Transferase(Phosphotransferase) domain 1 371 577 - -
Aev05g3623 580 SMART serkin_6 296 565 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aev05g3623 580 SMART ring_2 73 114 IPR001841 -
Aev05g3623 580 SUPERFAMILY Protein kinase-like (PK-like) 272 561 IPR011009 -
Aev05g3623 580 Gene3D Phosphorylase Kinase; domain 1 258 370 - -
Aev05g3623 580 PANTHER SERINE/THREONINE KINASE FAMILY PROTEIN 149 570 - -
Aev05g3623 580 CDD RING-H2_PA-TM-RING 72 115 - -
Aev05g3623 580 ProSitePatterns Serine/Threonine protein kinases active-site signature. 414 426 IPR008271 GO:0004672|GO:0006468
Aev05g3623 580 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 48 122 IPR013083 -
Aev05g3623 580 Pfam Protein kinase domain 298 557 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aev05g3623 580 ProSiteProfiles Zinc finger RING-type profile. 73 115 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g3623 Aev-Chr5 35248755 35253151 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev05g3623 272 569 Receptor kinase-like Gene Family AT5G61350 40.129 3.07e-58 207
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_URK-2 Aev05g3623 Pkinase 1.4e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g3623 - - aprc:113867593 593.578