Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g3620 ATGATCATGGAACTCAACGATTCCGGTTCCGCCGGCGACCACAGCAGCGCACCGCCGCCGCCGCTGTCTCCGCCGCAAGACTCTCGCTCTGGCCTCGGAATCGACCTCAACGAGATCCCCTTCACAGCTACTTCTCCTTCTTCCTTTGCTGAAACCCTACCGCCGCCACCACCACCGGACTCCGCCGTCGACATCGTCCGCGCCTACCATGAGAACCCCGGACCTCCGCTTGGCGCCCCTGCCGCGCTCCCCTCCGGCTCATCTCCCTGCGCCGCCTGCGGTAAGCCCGGGGCAGCTGGCTTCGTAGTCTGCGACGGCTGCGAGCGTGGGTTTCACGTCACGTGTGCTGGGATTCGTGGCGGCCGACAGGCGGCGAGCCTCGATGAGTGGCTCTGCGGTGAGTGTGTCGCTGGCGGAGTGAAGAGCAAGAGGTGGCCGCTCGGCGTCAAGTCCAAGCAGCTCCTTGACATCAATTCTTCGCCACCCAGCGACGCTGACGGTGACAGTGCTTCGGAGGAGTTGCCGGATTTGAGAAAGCACACTCTGGGTGATAATTCTTTTGGTGCCAATCCATTTGGTGCCCCAGTGACATGCTCAAACTACTACAATGGAAGTGCTTTTGGCTTCCAAAAGGCATCTGGAGTTGTAACACATGCTGTCAGAGTGGGCTTTGAGGATATATTGAATCATACCCAATCAATGACTAAATGCTTTGAGGAGGCTCTTAGAGACTTTATATCTGAAAGGCGTGGCGTACTAGAGGAAGGTTGGCGAGTGGAATTTAGACAATCAGTGAACAACTCTGACTTGTATGCAGTTTACTGTGCTCCTGATGGAAAAATTTTTGATTCAGTGTATGAAGTAGCTTGTTATCTGGGGCTGACATCAGGCTACAATTCTTTGGAATCTGAATTGAGATATGATAGGCCTTTATCCAGAAAGAGGAAGTCAACAAGGAATTCAGTAGCTAATGGTTTTGCAGAAAAGTGTGGAACCTTGATCAGCAGTTGTAAGGATTCTCCTTCAGATGGTTTAAGTGCGGAATGTACTGCTGATCGTGAACATCTCTCCAAAGCTACAAAAATTGCAAGAAAAGATGATGGTCATCCTTGTCCTCAGCAATCTGCTGATGAACTTCCTCTGCAGTTCCAGGATTTCTTTCTTCTCTCTTTGGGAAAAGTTGATAGTAGACCTTCATATTTCGATGTTCACCTTATATGTCCTATAGGTTATAAATCTTGCTGGCATGATAAAATTACTGGATCTCTTTTCACTTGTGAAGTTTTTGAGGGTGGTGATTCTGGACCTATATTTAGGATCAGAAGGTGTTCTTGTTCAGAATTCCCTGTTCCAGTTGGGTCAACCATACTCTCAATGTCAACTCTTTGTCAATCTGTGATCCAAACCAACGAAGAAGGTTTGACAAAGACTGATGATACTATGGATTATGATGATGATGAAAGTATCCAGATGATCCTGTTAGATCCTTGTGGGCCAGCAGAAAATGATGTCATGAATTGCATTGCAAGTTGCTCAAATGAAGCATGTGATACTCATACATCTGACATGTTACATCCTGTTCCTGGTTCAGTTTGTGATCAAACTAGAAACTCATTATCTGAAGACACGGGGTTGATTGATGAAATTGGTGAAATTTTGGTGGAAGAGCGGTCATCATCCGCAGCTTGGAGAGTAATGTCTCAAAAGTTAGTTAATGCTTGTCTTGATATCTGCAAGAAGAAAGGAACTCTCAAGTTCTATTGTGAACATGTTAAAACTGAACCGTGCTTGCGTAAATGGGATATAAAGAATGGAAAAAGTGATGCACATTTTTCTTCATTGGATAAATTTTGTAGTTCACTTGGTTCGGTCAGCATCCCAGATGTAATTTATGCAGACAATGATCTTGAAAGTCACAATGACACTTTAGGAAAATGGTTGGATCAAGATAGATTCGGATTAGATGTTGAATTTGTGCAAGAAGTGCTAGAACAGCTTCCTGGTGTCCAAGACTATTTGAAGTATGAACTTCTAAGTAGTCGGAATAATAGCTCTTCATTGCCAACAGTTGAGAATGGTTTCCTAGAGGTTGAATGGAGAGGTGGATCACAATATCAGGAAGAAGAAGCAGTTCAAGGTTTTTATAGGAGACCTAAAAAAATGATATTGACTGAAAAACATGTTAGGGAAGATCGTTGTCCACCACCTCCTGGGAAGCCACTATGCTCAAGGGTTCCTTGTGAACTTATTGGCGATATATATCAGGCTTGGGAACTTTTAGAGCGATTTGACGAAAGTTTGGACCTGAAAGAACCATTGTCTTTAGATGAGCTGGAGAAAGAACTTATCAACCCATGGTTTGATGGATCAGATTTTCGTGAGAAATCTGAGAGGGAAATTGATGGTTGTCAAGTTTTGAGTTCACAAGGAGCTGATGGTAATTGTAGACCAATATTGTCCCCAAGTTGTGAAGCTGGTCCATCAGGTTCTGTAGAAAGTTCCCATGCATTTATTCAAGTTGAAACAGTAGCGATGAAAGAGGCAGCTCAATTCAAGCTTGCGTCTTTTACTTATGCCAGATGTTTTGGTGTAGCTTTGACCAAGGCTCATAGTTCATTGCTAAGAGTGCTAATTGGTGAACTGCAGTCAAAGGTGGCTGCCCTGGTGGATCCAAATTTTGAACCTGGAGAAACTAAAACAAGGCGAGGAAGAAGGAAAGATATAGATAGTGCAGTTCCTGCTAAACGAACAAAGCTCAATATGCTTCCTATTAATGAATTGACTTGGCCAGAATTGGCTCGTCGATATATCTTGGCTGTCTTATCAATGGATGGGAACCTCGAGTCTAATGAAATTATTGCTCGTGAAAGTGGTAAAGTCTTTCGTTGCTTACGAGGTGATGGTGGTTTGCTGTGTGGATCCCTTACTGGTGTGGCTGGGATGGAAGCAGATGCACTGTTGCTTGCGGAAGCTACCAGGAAGATTTTTGGTTCTCTGAAGAGAGACAATGATTTACTAACCATGGAAGAAGAGGAGTCTGATGTGAATGGTGCTTCTGAAAAAAATTTGGGTAATGATGGTAATATTCCTGAATGGGCACAGAAGCTAGAGCCTGTCAGAAAGTTACCAACAAATGTGGGAACCCGAATCAGAAAGTGTGTTTATGATGCTCTAGCTAGGGATCCACCAGAATGGGCAAGGTTAACACTGGAGCACTCAATTAGTAAGGAAGTGTACAAGGGCAATGCATCTGGACCAACAAAGAAAGCAGTTCTTTCAGTGTTAGCTGTTGTCTCTGGTGAAGCAGCGGTGCAACAGATACCCAATAAAGGAAGGAAAAAGAAGATCAATATATCTATTTCTGACATTATCATGAAACAATGTCGCATTGTATTGCGTCGTGCAGCTGCTGCAGATGAGTCAAAGGTTTTCTGCAATTTGCTGGGCAGAAAGTTAACAAATTCTTCGGATAATGATGATGAAGGGCTTCTTGGATCTCCAGCAATGGTGGCCCGTCCTCTTGATTTCCGCACTATTGACTTAAGATTAGCTGCTGGAGCATATGGTGGATCGCATGAGGCTTTTCTTGAAGATGTTAGGGAGTTGTGGAACAATCTTCGTGCTGCTTTTGCGGATCAACCTGATTTAGTTGAACTGGCTGAAAATTTGTCCGAGAATTTTGAATCATTGTATAATGAGGAGGTCTTTGCCTATTTTGAAAAATTCGTGGAGTATTCTAAACTGGGATGCTTAAGTGCAGAAATGGGAAAAGAAGTTAATGATTTTATTGCCGCAACAAGTGAGATTCCTAAAGCCCCTTGGGATGAAGGAGTCTGTAAAGTATGTGGCATTGATAGGGATGATGATAGTGTGCTACTGTGTGATACTTGTGATGCTGAGTATCATACGTATTGCTTGAATCCTCCACTTGCAAGGATCCCAGAAGGAAACTGGTACTGCCCTTCTTGTGTTGATGGCAAACATGCAACTCAAGATGTTACAGATCGAATACGGAATATTGGCAAACGTCGAAGTAAGAAGTTCCAGGGTGAAGTTAATTCTCTATACTTGGAAGCTCTGACACATTTATCTACTGTAATGGAAGAAAAAGAATACTGGCAGTACAGCACAGGCGAGAGAACGTTCCTTCTGAAGTTTTTATGTGATGAGTTGCTTAACTCCTCTCTGATACGCCAGCACCTTGAGCAATGCGCAGATTTGTCTTCCGAGTTACATCAGAAATTACGTGCACACTCTGTCGAATGGAAAAGCCTGAAAACTAAAGAAGATATCTTGTCCACAAAAGCTGCAAAACTCGTTACAAGCATGCCAAATACCACTGGAGAAGTTGGTAGTAAGGAAGGGATGCTCTCAAGCACTGGTAGATGTCTGGTGCAGCCACATAATGCCATTGACAATCCTGATAATTTTGGGGGATCAGCTGATAGTCTTCCTTCAGAAGAGGTTACTAAAGAGAAGTATAGGCTCAATGGTATTGATAAAAGTGCATCTGTGACAAATTCAGACTCTGATACCCAGCATATGAATTCCATAGATGTAGAGGGAGAACATAGGAATGTCTCTGTGGCTGTGGAATCCCAACATATGGATAAATCTACAAACTCTTGTCCATCACCGAATCATGTGCCTCAAGAACAAAATGGGAGTGATGGAGCAGCTCAGATCCAGAGTAATCACCAGAAATGTGAGGGAAAGGACAAATCTACTCCCGTGACTTACCAGCAAGGACAATGCTTGCTCGTTGATGAGTCAGAACCCTACCACCTTGAGCTCAATGCCATCAAGCGTGATATTTCAAGTCTAGAAGACTCCATAACTAGGGTAGGATCACAGCTGCTGAAGCTCTCCATCCGCCGGGAGTTTTTGGGAATTGACTCCATTGGTAGACTGTACTGGGCTTCGGCTGTACGCGGAGGACGTTCACGGATGGTTGTTGATGCAAGTGCTGCAATGCTGCGTGGAAGAGGATTGGCAATTAGCTGCAATTCTGTGAAGTTTTCTTCTCTGCCGCATTTATCTGACAAGGATAACTATAAGATGTTAGGGGTGATGAAGGACACCCATCCTTTAATATCTCAGGCAAGTGATACTGTGGGTGTTAGCTCTCCATGGATTGCTTATGAAACTGATGCAGAAATTCAAGAGCTTTTGTGTTGGCTGAAGGACAATGACCCTAAAGAAAAAGAATTGAAAGATTCCATTATGATGTGGCCAAAATCAAGAGTTCAAGAGTTTCTCAATAAACAGATTGAAGCTCAGGTTGAGGACCAAGGACCTCTTTCTATTCCACGAAATGGAGAGAAGATATCACCTTCTCTTGTTACAAAGGCAACTTCTTTGCTGGAAAAGAGTTATGGTCCTTTCTGTGAGTGGGATGCCACTGAAGTGTCGAAGAAGCGGAGTAAAAAAGCCAGAACAAATAATGATGAAAAGTTTTATAGGTGTGATTGCCTAGAACCGATATGGCCTTCTAGGAAGCACTGCATGTCTTGCCACAAAACTGTTATGAGTGATGTTGAACTGGAGGGACACAATGATGGCAAATGTAACGTGGGTCTTCCTATCTTGGACAAGAATATTGGATCATCCAAAGGAAGAGGTCACCTGAGATGTGATTCCTCACATGAAAATTTCAGAGGTGATGCCGACACTGCTGGAAATGCAAATAAAGATTGTTCTAAGCTTAGCTCAAGGTTGATTAAATTCTCCAATGAAGAATCCACTTGCCCATTTAACTTCGAAGATATATGTTCCAAGTTTGTGACAAATGATTCCTGCAAGGAACATGTCAGAGAAGTAGGTCTTATTGGTTCAGATGGGGTCCCATCCTTTGTTTCTTCCATATCTCCTTTTGTTAGTGATTCTACAGCTATGCTATTATCAGCTCAAAGGGATGATATTGGAGGTGCATCTAATGCTTCAGAAAGCCAGGTTACTCAGGGAAGCACTGATGGGGCTGGCAAATGCCTTGATAAAAAATGCAGCATATCTTTAGCTGTAAATGAAAGCAGTAAAGCTGGTAAGTCCAACAAATCATGTTCAGAGCGAAGAGATGGAAAGCGCCATGATCTCACTCCTGCTTCAGATATAGGGGTTGATAGCTGCTGTGTGGTTCCCTTGTCTTCTTTGAGACCATTAGTTGGAAAAGTTTCACACATTTTAAGGCAACTGAAGATCAGTCTACTTGATATGGATGCTGCACTCCCAAATGTTGCTCTGAGACCATCAAAGGCTCAGTCGGGCAGAAGACAGGCATGGCGTGCATTTGTTAAATCTGCAGAGACTATATATGAGATGATTCAGGCGACAATTACACTCGAGGATATGATTAAGACAGAGTACTTAAGAAATGACTGGTGGTATTGGTCATCATTCTCAGCTGCTGCCAAATCTTCTACTTTGCCTTCCCTCGCCCTTCGCATATACTCCCTTGATTCAGCCATCATATATGAGAAGACGCCCAGTTCAAGGTTTGCTGACAGCTCTGAACCTTCTGCCATAGCAGAACAGAAACAACTGATCAATGTGGATGCAGAGAAGTTGAAAGTGATCCGTAAGTCAACTAGGAAAAGGAAAGAACCAGATGGTTGA 6612 0.4354 MIMELNDSGSAGDHSSAPPPPLSPPQDSRSGLGIDLNEIPFTATSPSSFAETLPPPPPPDSAVDIVRAYHENPGPPLGAPAALPSGSSPCAACGKPGAAGFVVCDGCERGFHVTCAGIRGGRQAASLDEWLCGECVAGGVKSKRWPLGVKSKQLLDINSSPPSDADGDSASEELPDLRKHTLGDNSFGANPFGAPVTCSNYYNGSAFGFQKASGVVTHAVRVGFEDILNHTQSMTKCFEEALRDFISERRGVLEEGWRVEFRQSVNNSDLYAVYCAPDGKIFDSVYEVACYLGLTSGYNSLESELRYDRPLSRKRKSTRNSVANGFAEKCGTLISSCKDSPSDGLSAECTADREHLSKATKIARKDDGHPCPQQSADELPLQFQDFFLLSLGKVDSRPSYFDVHLICPIGYKSCWHDKITGSLFTCEVFEGGDSGPIFRIRRCSCSEFPVPVGSTILSMSTLCQSVIQTNEEGLTKTDDTMDYDDDESIQMILLDPCGPAENDVMNCIASCSNEACDTHTSDMLHPVPGSVCDQTRNSLSEDTGLIDEIGEILVEERSSSAAWRVMSQKLVNACLDICKKKGTLKFYCEHVKTEPCLRKWDIKNGKSDAHFSSLDKFCSSLGSVSIPDVIYADNDLESHNDTLGKWLDQDRFGLDVEFVQEVLEQLPGVQDYLKYELLSSRNNSSSLPTVENGFLEVEWRGGSQYQEEEAVQGFYRRPKKMILTEKHVREDRCPPPPGKPLCSRVPCELIGDIYQAWELLERFDESLDLKEPLSLDELEKELINPWFDGSDFREKSEREIDGCQVLSSQGADGNCRPILSPSCEAGPSGSVESSHAFIQVETVAMKEAAQFKLASFTYARCFGVALTKAHSSLLRVLIGELQSKVAALVDPNFEPGETKTRRGRRKDIDSAVPAKRTKLNMLPINELTWPELARRYILAVLSMDGNLESNEIIARESGKVFRCLRGDGGLLCGSLTGVAGMEADALLLAEATRKIFGSLKRDNDLLTMEEEESDVNGASEKNLGNDGNIPEWAQKLEPVRKLPTNVGTRIRKCVYDALARDPPEWARLTLEHSISKEVYKGNASGPTKKAVLSVLAVVSGEAAVQQIPNKGRKKKINISISDIIMKQCRIVLRRAAAADESKVFCNLLGRKLTNSSDNDDEGLLGSPAMVARPLDFRTIDLRLAAGAYGGSHEAFLEDVRELWNNLRAAFADQPDLVELAENLSENFESLYNEEVFAYFEKFVEYSKLGCLSAEMGKEVNDFIAATSEIPKAPWDEGVCKVCGIDRDDDSVLLCDTCDAEYHTYCLNPPLARIPEGNWYCPSCVDGKHATQDVTDRIRNIGKRRSKKFQGEVNSLYLEALTHLSTVMEEKEYWQYSTGERTFLLKFLCDELLNSSLIRQHLEQCADLSSELHQKLRAHSVEWKSLKTKEDILSTKAAKLVTSMPNTTGEVGSKEGMLSSTGRCLVQPHNAIDNPDNFGGSADSLPSEEVTKEKYRLNGIDKSASVTNSDSDTQHMNSIDVEGEHRNVSVAVESQHMDKSTNSCPSPNHVPQEQNGSDGAAQIQSNHQKCEGKDKSTPVTYQQGQCLLVDESEPYHLELNAIKRDISSLEDSITRVGSQLLKLSIRREFLGIDSIGRLYWASAVRGGRSRMVVDASAAMLRGRGLAISCNSVKFSSLPHLSDKDNYKMLGVMKDTHPLISQASDTVGVSSPWIAYETDAEIQELLCWLKDNDPKEKELKDSIMMWPKSRVQEFLNKQIEAQVEDQGPLSIPRNGEKISPSLVTKATSLLEKSYGPFCEWDATEVSKKRSKKARTNNDEKFYRCDCLEPIWPSRKHCMSCHKTVMSDVELEGHNDGKCNVGLPILDKNIGSSKGRGHLRCDSSHENFRGDADTAGNANKDCSKLSSRLIKFSNEESTCPFNFEDICSKFVTNDSCKEHVREVGLIGSDGVPSFVSSISPFVSDSTAMLLSAQRDDIGGASNASESQVTQGSTDGAGKCLDKKCSISLAVNESSKAGKSNKSCSERRDGKRHDLTPASDIGVDSCCVVPLSSLRPLVGKVSHILRQLKISLLDMDAALPNVALRPSKAQSGRRQAWRAFVKSAETIYEMIQATITLEDMIKTEYLRNDWWYWSSFSAAAKSSTLPSLALRIYSLDSAIIYEKTPSSRFADSSEPSAIAEQKQLINVDAEKLKVIRKSTRKRKEPDG* 2204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g3620 2203 Pfam PHD-finger 90 136 IPR019787 -
Aev05g3620 2203 Pfam PHD-finger 1278 1324 IPR019787 -
Aev05g3620 2203 PANTHER OS02G0192300 PROTEIN 28 2203 - -
Aev05g3620 2203 SUPERFAMILY FYVE/PHD zinc finger 1267 1328 IPR011011 -
Aev05g3620 2203 MobiDBLite consensus disorder prediction 1 62 - -
Aev05g3620 2203 SUPERFAMILY Bromodomain 1113 1233 IPR036427 GO:0005515
Aev05g3620 2203 SUPERFAMILY FYVE/PHD zinc finger 54 136 IPR011011 -
Aev05g3620 2203 MobiDBLite consensus disorder prediction 1495 1515 - -
Aev05g3620 2203 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1234 1338 IPR013083 -
Aev05g3620 2203 CDD PHD1_Lid2p_like 1278 1323 - -
Aev05g3620 2203 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 87 142 IPR013083 -
Aev05g3620 2203 ProSiteProfiles FYR domain FYRC motif profile. 536 679 IPR003889 GO:0005634
Aev05g3620 2203 MobiDBLite consensus disorder prediction 1500 1515 - -
Aev05g3620 2203 MobiDBLite consensus disorder prediction 2013 2032 - -
Aev05g3620 2203 PANTHER METHYL-CPG-BINDING DOMAIN-CONTAINING PROTEIN 9 28 2203 - -
Aev05g3620 2203 Gene3D - 379 516 - -
Aev05g3620 2203 MobiDBLite consensus disorder prediction 1533 1566 - -
Aev05g3620 2203 MobiDBLite consensus disorder prediction 1533 1576 - -
Aev05g3620 2203 Pfam WSTF, HB1, Itc1p, MBD9 motif 1 1358 1402 IPR028942 -
Aev05g3620 2203 ProSitePatterns Zinc finger PHD-type signature. 90 135 IPR019786 -
Aev05g3620 2203 Gene3D - 1107 1233 IPR036427 GO:0005515
Aev05g3620 2203 ProSiteProfiles Zinc finger PHD-type profile. 87 138 IPR019787 -
Aev05g3620 2203 ProSitePatterns Zinc finger PHD-type signature. 1279 1323 IPR019786 -
Aev05g3620 2203 ProSiteProfiles FYR domain FYRN motif profile. 378 431 IPR003888 GO:0005634
Aev05g3620 2203 MobiDBLite consensus disorder prediction 2016 2032 - -
Aev05g3620 2203 ProSiteProfiles Zinc finger PHD-type profile. 1276 1326 IPR019787 -
Aev05g3620 2203 ProSiteProfiles Methyl-CpG-binding domain (MBD) profile. 243 314 IPR001739 GO:0003677
Aev05g3620 2203 SMART PHD_3 89 136 IPR001965 -
Aev05g3620 2203 SMART PHD_3 1278 1324 IPR001965 -
Aev05g3620 2203 Pfam Methyl-CpG binding domain 244 297 IPR001739 GO:0003677
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev05g3620 26 2203 C2H2 Transcription Factor Family AT3G01460 44.627 0.0 1687
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR PHD Aev05g3620 MBD 2.4e-10 CL0081