Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g3619 ATGGAATCTGGAAGGCTTTTCTTTGACCCCTCCGCTTGTCGTGGCGGGAACAACATGCTTTTCCTAGGGAATGCTGATCTTGCTTTTCGAGGAAGATCGATGATAAGCATGGAGGAAAGCTCGAAGAGGCGACCTTTCTTCAGCTCGCCGGAGGAACTGTATGATGAGGAGTACTATGAGGAGCAGTTGCCGGAGAAGAAGCGCCGCCTCACCTCCGAGCAGGTCCTTCTGTTGGAGAAGAGCTTTGAGGAAGAGAACAAGCTGGAGCCGGAGAGGAAGACCCAGTTGGCCAAGAAGCTGGGGTTGCAGCCCCGGCAGGTGGCCGTGTGGTTCCAGAACCGCAGGGCTCGATGGAAGACCAAGCAACTCGAAAGGGATTATGATGTTCTCAAGGCTTCTTATGATTCCCTACTTTCAACATATGATTCCATCTTGAAGGAGAATGAGAACCTGAAATCTGAGGTGGTAACCTTAAATGAGAAGCTTCAAATTCAAGCCAAAGAGATTCCTGGGGAGCCAATATCAGACAAAAAGGCTGACCCAATTCCTGTGGACATCGCTCAGATCTTCAGCATGAAGGTCGAGGACCGCCTCAGCACTGGAAGTGTGGGGAGCGCTGTGGTGGATGAGGGCAGTCCCCAGCTTGTCGTTGACAGTGTTGATTCGTATTTCCCTGCTGACAACTACGGCGGTTGCATCAACACGGTCGAGAGGGTTCAGTCGGAGGAGGACGATGGGAGTGACGACGGGAGGAGTTACTTCTCGGATGTGTTTGTGGCAGCTGAGATTGAGCAGCAGGACCATGACCAAGGAGAGGGGTTGGGTTGGTGGGGTAATATGTTGAATAATGCAGCAGTGCTTTCCTTAATTAATTAG 876 0.5148 MESGRLFFDPSACRGGNNMLFLGNADLAFRGRSMISMEESSKRRPFFSSPEELYDEEYYEEQLPEKKRRLTSEQVLLLEKSFEEENKLEPERKTQLAKKLGLQPRQVAVWFQNRRARWKTKQLERDYDVLKASYDSLLSTYDSILKENENLKSEVVTLNEKLQIQAKEIPGEPISDKKADPIPVDIAQIFSMKVEDRLSTGSVGSAVVDEGSPQLVVDSVDSYFPADNYGGCINTVERVQSEEDDGSDDGRSYFSDVFVAAEIEQQDHDQGEGLGWWGNMLNNAAVLSLIN* 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g3619 291 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN HAT5 1 261 - -
Aev05g3619 291 Coils Coil 134 168 - -
Aev05g3619 291 PRINTS Lambda-repressor HTH signature 92 101 IPR000047 GO:0003677
Aev05g3619 291 PRINTS Lambda-repressor HTH signature 101 117 IPR000047 GO:0003677
Aev05g3619 291 ProSiteProfiles 'Homeobox' domain profile. 61 121 IPR001356 GO:0003677
Aev05g3619 291 SUPERFAMILY Homeodomain-like 58 123 IPR009057 -
Aev05g3619 291 CDD homeodomain 66 122 IPR001356 GO:0003677
Aev05g3619 291 Pfam Homeobox associated leucine zipper 121 163 IPR003106 GO:0006355|GO:0043565
Aev05g3619 291 ProSitePatterns 'Homeobox' domain signature. 96 119 IPR017970 GO:0000981|GO:0006355
Aev05g3619 291 Pfam Homeodomain 66 119 IPR001356 GO:0003677
Aev05g3619 291 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN 1 261 IPR045224 GO:0003700
Aev05g3619 291 SMART HOX_1 64 125 IPR001356 GO:0003677
Aev05g3619 291 Gene3D - 59 127 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g3619 Aev-Chr5 35217113 35219413 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev05g3619 1 278 Homeobox Transcription Factor Family AT3G01470 60.563 1.30e-104 304
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Aev05g3619 Homeodomain 8.7e-18 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g3619 K09338 - gmx:100797836 437.187