Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g3597 ATGAACGGAAAAGCCTCTGTTTCGAAAGAGCTCAATGCCAAGCACGCCAAGATTTTAGAGGGACTTCTTAAGCTACCTGATAACAGGGAATGTGCAGATTGCCGGAACAAGGCACCAAGGTGGGCAAGTGTGAATCTAGGAATTTTCATTTGCATGCAGTGTTCCGGAATTCACCGGAGTCTTGGAGTACATATATCAAAGGTGCGGTCCACAACTTTGGATACATGGTTGGCAGAGCAAGTGGCTTACATGCAATTTATGGGCAATGTGAAGGCTAACAAGCACTGGGAGGCAGAATTGTCACCAAATTTTGACAGAAATGGATATGGAATCGACAAGTTTATCCGTTCCAAGTATGTGGATAAAAAGTGGGCATTAGAAGGAGGAGTAGAGTCAGGTGAAATAATTCTTGACTTGAAAGTGTCACAACCACAAATTGATGGAACCAAGAGTACTAGTAGTGTTCCAGCAAGGAATAGGAGATTGTCTCTTGAGGAAAGCATTCTAGTCAGCCACATGGCAAAAATTCAACCCCCACTTCACTCTCCACTAGTAACAAAATCTAAAGAAGCCCCCTTAGATTTGCCAAAGAGAGTTTCAGCACAAATAAGGAGGCCATCTGCATCTGTTGATTTTGATAACATCATCACTAGAAACAGCAGCAATGGTGCCACCATTGATCTTTTCAGCTTGCTTGACATCAATGATGACAATAATAATGATGACAATAATAATAATAACAATAAAAAGAAGGATGTCTCAACCCCACCACCTCCTTCAAGCTGGACAAGATTTGATT 799 0.4168 MNGKASVSKELNAKHAKILEGLLKLPDNRECADCRNKAPRWASVNLGIFICMQCSGIHRSLGVHISKVRSTTLDTWLAEQVAYMQFMGNVKANKHWEAELSPNFDRNGYGIDKFIRSKYVDKKWALEGGVESGEIILDLKVSQPQIDGTKSTSSVPARNRRLSLEESILVSHMAKIQPPLHSPLVTKSKEAPLDLPKRVSAQIRRPSASVDFDNIITRNSSNGATIDLFSLLDINDDNNNDDNNNNNNKKKDVSTPPPPSSWTRFD 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g3597 266 Gene3D Arf GTPase activating protein 2 128 IPR038508 -
Aev05g3597 266 MobiDBLite consensus disorder prediction 249 266 - -
Aev05g3597 266 SUPERFAMILY ArfGap/RecO-like zinc finger 16 126 IPR037278 -
Aev05g3597 266 ProSiteProfiles ARF GTPase-activating proteins domain profile. 16 132 IPR001164 GO:0005096
Aev05g3597 266 PANTHER ADP-RIBOSYLATION FACTOR GTPASE-ACTIVATING PROTEIN AGD5 1 266 IPR044520 GO:0005096
Aev05g3597 266 MobiDBLite consensus disorder prediction 239 266 - -
Aev05g3597 266 CDD ArfGap 19 119 - -
Aev05g3597 266 SMART arf_gap_3 16 132 IPR001164 GO:0005096
Aev05g3597 266 Pfam Putative GTPase activating protein for Arf 17 126 IPR001164 GO:0005096
Aev05g3597 266 PANTHER ADP-RIBOSYLATION FACTOR GTPASE-ACTIVATING PROTEIN AGD15-RELATED 1 266 - -
Aev05g3597 266 PRINTS HIV Rev interacting protein signature 68 89 IPR001164 GO:0005096
Aev05g3597 266 PRINTS HIV Rev interacting protein signature 28 47 IPR001164 GO:0005096
Aev05g3597 266 PRINTS HIV Rev interacting protein signature 47 64 IPR001164 GO:0005096
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g3597 Aev-Chr5 35078269 35080695 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev05g3597 22 119 C2H2 Transcription Factor Family AT4G05330 49.038 3.56e-27 105
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g3597 K12486 - gmx:100802691 309.686