Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g3593 ATGGCTGATGGTCATGAGACTGACAAGAACATTGAGGTGTGGAAGATCAAGAAATTGATCAAAGCTCTTGAGGCAGCTAGAGGAAATGGGACCAGTATGATTTCTCTTATCATGCCACCACGTGATCAGATATCTCGTGTTACCAAGATGCTTGGGGATGAGTTTGGTACTGCTTCAAACATTAAGAGCAGGGTGAATCGACAATCTGTGCTTGGGGCAATCACCTCTGCCCAGCAGAGGCTTAAGCTTTATAACAAGGTTCCTCCAAATGGGCTTGTTCTGTATACTGGCACTATTGTGACTGAAGATGGGAAGGAAAAGAAGGTGACTATTGATTTTGAGCCTTTCAGACCTATCAATGCTTCCCTTTATCTCTGTGACAACAAGTTTCATACTGAAGCTCTTAATGAGCTCCTGGAGTCTGATGACAAGTTTGGATTTATTGTCATGGATGGTAATGGTACTCTGTTTGGGACCTTGAGTGGTAATACGAGAGAGGTGCTTCATAAATTTAGTGTGGACCTCCCAAAGAAACATGGAAGAGGAGGGCAATCAGCTCTTCGATTTGCCCGTCTTCGTATGGAGAAGCGTCATAACTATGTGAGGAAGACTGCAGAGCTGGCAACACAGTTTTATATCAATCCTGCTACCAGCCAGCCGAATGTTTCTGGATTGATACTTGCTGGTTCAGCTGATTTCAAGACTGAGCTTAGTCAGTCAGATATGTTTGATCCTCGACTTCAGGCAAAAATTCTTAATGTTGTCGATGTATCCTATGGAGGGGAAAATGGGTTTAATCAGGCTATTGAACTTTCTGCTGAGATTCTGTCTAATGTGAAGTTTATTCAGGAGAAACGCTTGATTGGAAAGTACTTTGAGGAAATTAGCCAGGATACTGGAAAGTATGTTTTTGGGGTTGATGATACACTGAAAGCTCTGGAGGTGGGAGCTGTTGAGACACTTATTGTCTGGGAAAATTTGGATATGAATAGGTTTGTCTTGAAAAATAGTGCCAGTGGTGAGGTTGTCATTCAGCACTTCAACAAGGAACAGGAGGCCAACCAGGACAATTTTCGTGATCCTGCAACCAATGCTGATTATGAGGTTCAGGAAAAGATGTCTCTGCTGGAGTGGTTTGCAAATGAGTATAAACGATTTGGCTGCACACTTGAGTTTGTCACAAATAAGTCACAAGAAGGATCACAGTTTTGCAGAGGTTTTGGTGGGATAGGTGGGATCTTGCGATACCAGCTTGACATGAGGACATTTGATGATTTCTCTGATGACGGAGTAAGTGAGGGGGTTGCATGTGCTGCAACTGCTGCCGCCGCCGCTCCTCCTCTTCCTGTTGCATGTGCTGCAACAAACCGTGCTTCCAAAAGAAACAACCTAGAATCAATGCAGCCTTTGTTGGATCTGGACGTCTCGTCAACCAAGCAAAGCATGGTGAACTAA 1455 0.4385 MADGHETDKNIEVWKIKKLIKALEAARGNGTSMISLIMPPRDQISRVTKMLGDEFGTASNIKSRVNRQSVLGAITSAQQRLKLYNKVPPNGLVLYTGTIVTEDGKEKKVTIDFEPFRPINASLYLCDNKFHTEALNELLESDDKFGFIVMDGNGTLFGTLSGNTREVLHKFSVDLPKKHGRGGQSALRFARLRMEKRHNYVRKTAELATQFYINPATSQPNVSGLILAGSADFKTELSQSDMFDPRLQAKILNVVDVSYGGENGFNQAIELSAEILSNVKFIQEKRLIGKYFEEISQDTGKYVFGVDDTLKALEVGAVETLIVWENLDMNRFVLKNSASGEVVIQHFNKEQEANQDNFRDPATNADYEVQEKMSLLEWFANEYKRFGCTLEFVTNKSQEGSQFCRGFGGIGGILRYQLDMRTFDDFSDDGVSEGVACAATAAAAAPPLPVACAATNRASKRNNLESMQPLLDLDVSSTKQSMVN* 485
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g3593 484 SUPERFAMILY L30e-like 278 420 IPR029064 -
Aev05g3593 484 Gene3D eRF1 domain 2 136 277 IPR042226 -
Aev05g3593 484 Gene3D - 279 434 IPR029064 -
Aev05g3593 484 Gene3D eRF1 domain 1 2 135 IPR024049 -
Aev05g3593 484 PANTHER PEPTIDE CHAIN RELEASE FACTOR SUBUNIT 1 1 431 IPR004403 GO:0003747|GO:0006415
Aev05g3593 484 SMART eRF1_1_2 4 140 IPR005140 -
Aev05g3593 484 Pfam eRF1 domain 3 281 418 IPR005142 -
Aev05g3593 484 Pfam eRF1 domain 2 144 277 IPR005141 -
Aev05g3593 484 Pfam eRF1 domain 1 18 138 IPR005140 -
Aev05g3593 484 PANTHER EUKARYOTIC PEPTIDE CHAIN RELEASE FACTOR SUBUNIT 1-3-LIKE 1 431 - -
Aev05g3593 484 SUPERFAMILY N-terminal domain of eukaryotic peptide chain release factor subunit 1, ERF1 6 140 IPR024049 -
Aev05g3593 484 SUPERFAMILY Translational machinery components 142 276 - -
Aev05g3593 484 TIGRFAM aRF1/eRF1: peptide chain release factor 1, archaeal and eukaryotic forms 13 417 IPR004403 GO:0003747|GO:0006415
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g3593 Aev-Chr5 35042816 35044726 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev05g3593 1 433 Eukaryotic Initiation Factors Gene Family AT3G26618 89.607 0.0 812
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g3593 K03265 - gmx:100785916 825.083