Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g3586 ATGTCACCGGTTGGATTACCACCTGGATTTAGGTTCCATCCAACAGATGAAGAGCTTGTGAACTATTATCTCAAGAGGAAGATCAATGGCCAAGAAATTGAACTTGATATCATTCCTGAGGTTGATCTCTACAAATGTGAGCCTTGGGAATTAGCAGAGAAATCATTTTTGCCAAGTAGAGACCCAGAGTGGTACTTCTTTGGGCCAAGGGACAGGAAATACCCAAACGGGTTCAGAACAAACAGAGCAACAAGAGCAGGGTACTGGAAATCCACAGGCAAGGACAGGAGAGTGTCATGCCAGAGCAGACCCATTGGTATGAAGAAGACTCTTGTTTACTACAGAGGAAGGGCTCCTCAAGGTATCCGAACTGATTGGGTTATGCATGAGTATCGCCTTGATGATAAAGATTCTGAGGACACCTCTGGATTGCAGGATACATATGCATTATGCAGAGTGTTCAAGAAAAATGGGATCTGTTCTGATGTTGAAGAGCAACAAGGGCAATGTAGTGTGTCACTAATTGAGAGCTCTCAAAACATAATCAACAACAATAATGAGTGTGAAACAATGTCACCAGATATAGCAGGGGTATCATCTTCATGCTTGGAAGAGGATCAAGACAAAGATGATTCATGGATGCAGTTCATCACAGAAGATGCATGGTATTCTTCTAATGCAGCAGCAATGGCTGGTGGTGAAGAACTGTCACATATCACATTCACAAACTAA 732 0.4262 MSPVGLPPGFRFHPTDEELVNYYLKRKINGQEIELDIIPEVDLYKCEPWELAEKSFLPSRDPEWYFFGPRDRKYPNGFRTNRATRAGYWKSTGKDRRVSCQSRPIGMKKTLVYYRGRAPQGIRTDWVMHEYRLDDKDSEDTSGLQDTYALCRVFKKNGICSDVEEQQGQCSVSLIESSQNIINNNNECETMSPDIAGVSSSCLEEDQDKDDSWMQFITEDAWYSSNAAAMAGGEELSHITFTN* 244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g3586 243 ProSiteProfiles NAC domain profile. 6 156 IPR003441 GO:0003677|GO:0006355
Aev05g3586 243 SUPERFAMILY NAC domain 4 157 IPR036093 GO:0003677|GO:0006355
Aev05g3586 243 PANTHER NAC DOMAIN-CONTAINING PROTEIN 86-LIKE 1 243 - -
Aev05g3586 243 Pfam No apical meristem (NAM) protein 7 133 IPR003441 GO:0003677|GO:0006355
Aev05g3586 243 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 1 243 - -
Aev05g3586 243 Gene3D NAC domain 15 159 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g3586 Aev-Chr5 34965327 34968548 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev05g3586 1 234 NAC Transcription Factor Family AT3G17730 78.689 4.30e-135 378
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Aev05g3586 NAM 1e-39 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g3586 - - adu:107490712 456.447