Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g3583 ATGGAAGTAGGAGTTGGCGTTCAGAGGAAGTGGAAAGCTGACGTGGCCATAAAGCGCAGGGGAAGGTATGGTGGGGACCACAACAGCATACTCCGGATTTCCACAATCGGGGTCTTCCAGCAAAATCACAGGACTGGCTCTGATTTTGCTCGAATGGAGATGCAGGACCAAATAGAAAGCACGAAGTCTAACAGCTCTGGCTCAGCTAGTAAGTGCAATTCCAATGGTGGAACACAATCTGAGAAGGTGGTTCCATTGCGGGACTCAACTTCCATTGGAGGCAACCACACCCCCAAGGTGAGGAAACCATATACCATTACCAAACAAAGGGAGAAGTGGACAGAGGAAGAGCATCAAAAGTTCCTCGAGGCTTTGAAGTTGTATGGTCGTGGCTGGCGTCAAATTGAAGAGCATATAGGTACCAAAACTGCTGTTCAGATACGAAGCCATGCTCAGAAGTTTTTCTCTAAGGTTGTGCGGGAATCTGATGGCAGTGCAGAGAGTTCTATACAACCAATTGACATACCTCCTCCTCGTCCTAAAAGGAAACCTCTTCATCCATATCCCCGTAAATTGGTTGATGCTTTCAAAGGACACTCCACACTAATTGAGCAAGAAAAATCTCCATCTCCAAACCTGCCAGCTGCAGAGAAAGACTCGCAGTCTCCAACCTCTGTGCTATCTGCATTTGGTTCAGAGGCATTTGGGTCAGCATTTTCAGAGCAGACCAACAGATGCCTTTCACCGAACTCTTGCACAACTGAGATTCACTCAGCCAACTTGTCACCTGTTGAGAAGGATAATGATTGTATGACATCCAGCCCATCCGAGGAGGAAGACAAAGGGCCTTTAGCTTCAGCCCCTTTATCTAGCAGTTCAAACCCACACTTGCGCATGAAGTCTGAGTTTTGTTTTAAGGAAACTGAGCATTTTAAGGAAGATGCTGTTAATATGCCACGCGCCGCTACTATTAAGCTTTTTGGAAGAACCGTCTCGATGGTAGGCAATCAGGAGTTGCTGAGTGTTGAAGAACAGAATATAAAGCCAATTACTAAGCCTGATGACATAGATGATTTTGAGAATGAGAAGCTTGGTCAAGCATGGCCATCCAAGCAGCTTGATACCGACTTATCACTGGGAATGTGCAAGAATAACTTGCAAATAGCACCTGGTGGAGATAAAGTGATAAGCATTGAACAACCAAAAGAAAGTCAATGCTCTGATGAATCTTCTGCTGACCTATCTATGCCATGGTGGAGTTTGTACCAAGACCTCCCAGCTGTTTACTCCAAACCGTGTATTCAGGTTTTAAATCCTACACCTCTCCGTCCCTCTTTGAGCGTTAGAATGAGGGAGGAAGAAAGTTCTTGCACTGGTTCTAATGCTGGTTCAGTTAGTGAAGCGGAAAACCGAGGCAAGTCCTCAGATGCTGTTGATTCAAAAGAGGAGGTAGTGCCCCAGAAATCTGCAAGGGGATTTGTACCATACAAAAGATGTTTAGCAGAAAGAGATTCTAATTCTTTGATTGTTGAATTGGAAGAAAGGAAGGGGCAACGGGCTCGAGTGTGCTCATAG 1575 0.4552 MEVGVGVQRKWKADVAIKRRGRYGGDHNSILRISTIGVFQQNHRTGSDFARMEMQDQIESTKSNSSGSASKCNSNGGTQSEKVVPLRDSTSIGGNHTPKVRKPYTITKQREKWTEEEHQKFLEALKLYGRGWRQIEEHIGTKTAVQIRSHAQKFFSKVVRESDGSAESSIQPIDIPPPRPKRKPLHPYPRKLVDAFKGHSTLIEQEKSPSPNLPAAEKDSQSPTSVLSAFGSEAFGSAFSEQTNRCLSPNSCTTEIHSANLSPVEKDNDCMTSSPSEEEDKGPLASAPLSSSSNPHLRMKSEFCFKETEHFKEDAVNMPRAATIKLFGRTVSMVGNQELLSVEEQNIKPITKPDDIDDFENEKLGQAWPSKQLDTDLSLGMCKNNLQIAPGGDKVISIEQPKESQCSDESSADLSMPWWSLYQDLPAVYSKPCIQVLNPTPLRPSLSVRMREEESSCTGSNAGSVSEAENRGKSSDAVDSKEEVVPQKSARGFVPYKRCLAERDSNSLIVELEERKGQRARVCS* 525
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g3583 524 MobiDBLite consensus disorder prediction 160 188 - -
Aev05g3583 524 PANTHER SWI/SNF COMPLEX-RELATED 53 511 - -
Aev05g3583 524 CDD SANT 112 155 IPR001005 -
Aev05g3583 524 Gene3D - 112 159 - -
Aev05g3583 524 SMART sant 109 157 IPR001005 -
Aev05g3583 524 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 105 159 IPR017930 -
Aev05g3583 524 Pfam Myb-like DNA-binding domain 110 153 IPR001005 -
Aev05g3583 524 MobiDBLite consensus disorder prediction 451 471 - -
Aev05g3583 524 ProSiteProfiles SANT domain profile. 108 159 IPR017884 -
Aev05g3583 524 MobiDBLite consensus disorder prediction 56 96 - -
Aev05g3583 524 MobiDBLite consensus disorder prediction 472 486 - -
Aev05g3583 524 MobiDBLite consensus disorder prediction 258 295 - -
Aev05g3583 524 ProSiteProfiles Myb-like domain profile. 105 155 IPR001005 -
Aev05g3583 524 MobiDBLite consensus disorder prediction 448 487 - -
Aev05g3583 524 MobiDBLite consensus disorder prediction 56 106 - -
Aev05g3583 524 MobiDBLite consensus disorder prediction 204 225 - -
Aev05g3583 524 SUPERFAMILY Homeodomain-like 104 158 IPR009057 -
Aev05g3583 524 PANTHER PROTEIN REVEILLE 7-RELATED 53 511 - -
Aev05g3583 524 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 108 157 IPR006447 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g3583 Aev-Chr5 34950643 34957468 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Aev05g3583 Myb_DNA-binding 1.8e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g3583 - - gmx:778089 605.52