Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g3582 ATGGAGTATGGCAGTGGAGGGAGTGGTGGTTCCCCAGGAGACCACCACCATCACCACCATAGCCACCACCATGAAGGTGGTGGTTCTTCCTCTGAGAGGAAGAAGAAACGCTACCACCGCCACACTGCAAACCAGATTCAAAGGCTTGAAGCGACGTTCCATGAGTCTCGTCACCCAGATGAGAAGCAGAGGTTGCAATTAAGCAGGGAATTAGGCCTGGCTCCTAGACAGATCAAATTCTGGTTCCAAAACAGGAGGACCCAGTGGAAGGCGATTAATGAAAGAGATGATAACCGTGCTCTGAGGGCAGAGAATGATAAGATACGGTGTGAGAACATTGCCATAAGAGAGGCTCTCAAGAATGCTATGTGCCCCAATTGTGGTGGTGGACCTCCCCTCAATGAAGAGTCCTATTTTGATGAGCAAAAATTGAGACTTGAAAATGCTCATCTCAAAGACGAGCTTGATAGAGTGTCTAGCATTGCAGCCAAGTACATTGGGAGGCCAATTTCTCAGCTCCCACCAGTTCAGCCTATTCACATTTCCTCCCTAGACTTGTCCATGGCGAGTTTCGGTGGACAGGTGTTGGGAGGGCCTTCCCTGGACCTTGATCTTCTCCCGGGGAGCTCGATGGCGGCTGCGGCGGCCGTGCCTAACGTGCCTTACCAGCCGGCCTGCTTCTCGGAGATGGACAAGTCCCTGATGTCAGACATTGCCTCGAATGCAATGGAGGAGCTGCTGAGGCTGTTGCAGACGAATGAGCCATTGTGGATGAAGTCCAGCACTGATGGCAGAGATGTGCTTAACCTTGACACCTATGAGAGGATGTATTCAAAGGCCAACACTCACTTGAAGAACCCCAGTGTTCGGGTCGAAGCTTCTAGGGACTCTGGCCTTGTTATTATGAATGCCCTTACTCTGGTTGACATGTTCATGGACCCTAACAAGTGGATGGAGCTGTTTCCCACAATTGTGACTGTGGCAAGAACTATTGAAGTCATATCATCTGGGATGTTAGGTGGTCCTAGTGGTACTCTGCAATTGATGTATGAAGAGGTGCAAGTGCAATCTCCACTAGTATCGACTCGGGAGTTCTACTTCCTGCGATACTGTCAGCAAATGGAGCAAGGGTCGTGGGCAATAGTAGATGTATCTTATGAGTTTCCTCATGACAACCACTTTGCTCCTCAATTCCGATCTCATCGCTTTCCCTCCGGCTGCTTCATCCAGGACATGCCTAATGGCTATTCCAAGGTTACTTGGGTTGAGCATGTAGAGATTGAAGATAGGACTCCGGTTCATCGGCTTTACCGGAATCTTATTTACAGTGGAACAGCATTTGGAGCACCCAGATGGATCACAGTGCTCCAGAGGACGTGTGAGAGATTAGCTTGTCTGATGAATGCCAATTCTACCCGGGACCTCGGAGGAGTGATTCCGTCTGGTGAGGGGAAGAGGAGCATGATGAAGCTAGCACAGAGGATGGTGTCGAATTTCTGCGGGAGCATAAGCTCGTCGCCGGGCCACCAGTGGACCACACTGTCCGGGCTGCATGAGGTGGGAGTGAGGGTGACTGTCCACAAGAGCACAGACCCTGGCCAGCCTAATGGTGTTGTTCTCAGTGCTGCCACCACCATTTGGCTCCCTCTCCCTCCACAGGCCGTCTTCAATTTCTTCAAGGATGAAAGAAAAAGGCCTCAGTGGGATGTTCTCTCCAATGGTAATGCTGTGCAAGAGGTTGCTCATATAGCAAATGGTTCAAACCATGGTAACTGCATATCTGTGCTTAGGGCATTCAACACAAGCCAGAACAACATGCTGATACTGCAGGAGTGCTGCACAGACTCATCAGGGTCCCTAGTAGTGTACTGCTCGGTGGACCTTCCATCGATCAACATCGCGATGAGCGGCGAGGACCCATCGTACATCCCTCTGGTGCCATCAGGGTTCACAATCACACCAGATGGAGGAGGAGGAGGACAGAGTGATCAGGTAGCAGGGGATGGAGCATCAACAAGCTCAAGCACAAGCAACAACAATGGTGCAAGATCAGGAGGAGGAGGAGGATCACTGGTCACAATCGCATTCCAGATACTAGTAAGCAGCTTGCCATCCGCCAAGCTCAACATGGAGTCGGTCTCAACTGTTAATACACTCATCGGCACCACTGTCCACCAAATAAAAGCTGCTTTGAATTGTCCTACGTCCTGA 2211 0.5066 MEYGSGGSGGSPGDHHHHHHSHHHEGGGSSSERKKKRYHRHTANQIQRLEATFHESRHPDEKQRLQLSRELGLAPRQIKFWFQNRRTQWKAINERDDNRALRAENDKIRCENIAIREALKNAMCPNCGGGPPLNEESYFDEQKLRLENAHLKDELDRVSSIAAKYIGRPISQLPPVQPIHISSLDLSMASFGGQVLGGPSLDLDLLPGSSMAAAAAVPNVPYQPACFSEMDKSLMSDIASNAMEELLRLLQTNEPLWMKSSTDGRDVLNLDTYERMYSKANTHLKNPSVRVEASRDSGLVIMNALTLVDMFMDPNKWMELFPTIVTVARTIEVISSGMLGGPSGTLQLMYEEVQVQSPLVSTREFYFLRYCQQMEQGSWAIVDVSYEFPHDNHFAPQFRSHRFPSGCFIQDMPNGYSKVTWVEHVEIEDRTPVHRLYRNLIYSGTAFGAPRWITVLQRTCERLACLMNANSTRDLGGVIPSGEGKRSMMKLAQRMVSNFCGSISSSPGHQWTTLSGLHEVGVRVTVHKSTDPGQPNGVVLSAATTIWLPLPPQAVFNFFKDERKRPQWDVLSNGNAVQEVAHIANGSNHGNCISVLRAFNTSQNNMLILQECCTDSSGSLVVYCSVDLPSINIAMSGEDPSYIPLVPSGFTITPDGGGGGQSDQVAGDGASTSSSTSNNNGARSGGGGGSLVTIAFQILVSSLPSAKLNMESVSTVNTLIGTTVHQIKAALNCPTS* 737
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g3582 736 ProSitePatterns 'Homeobox' domain signature. 67 90 IPR017970 GO:0000981|GO:0006355
Aev05g3582 736 SUPERFAMILY Homeodomain-like 14 92 IPR009057 -
Aev05g3582 736 MobiDBLite consensus disorder prediction 1 42 - -
Aev05g3582 736 MobiDBLite consensus disorder prediction 665 684 - -
Aev05g3582 736 CDD START_ArGLABRA2_like 232 461 - -
Aev05g3582 736 CDD homeodomain 35 90 IPR001356 GO:0003677
Aev05g3582 736 SUPERFAMILY Bet v1-like 483 728 - -
Aev05g3582 736 Gene3D - 19 108 - -
Aev05g3582 736 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN ROC8 13 734 - -
Aev05g3582 736 Pfam START domain 238 462 IPR002913 GO:0008289
Aev05g3582 736 ProSiteProfiles 'Homeobox' domain profile. 32 92 IPR001356 GO:0003677
Aev05g3582 736 MobiDBLite consensus disorder prediction 653 684 - -
Aev05g3582 736 SUPERFAMILY Bet v1-like 229 463 - -
Aev05g3582 736 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 13 734 IPR042160 -
Aev05g3582 736 SMART START_1 237 462 IPR002913 GO:0008289
Aev05g3582 736 ProSiteProfiles START domain profile. 228 465 IPR002913 GO:0008289
Aev05g3582 736 Pfam Homeodomain 35 90 IPR001356 GO:0003677
Aev05g3582 736 Gene3D - 235 462 IPR023393 -
Aev05g3582 736 Gene3D - 489 717 IPR023393 -
Aev05g3582 736 SMART HOX_1 33 96 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g3582 Aev-Chr5 34931035 34934216 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev05g3582 31 736 Homeobox Transcription Factor Family AT1G73360 65.730 0.0 904
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Aev05g3582 START 4.7e-48 CL0209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g3582 K09338 - gmx:100809075 1134.78