Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g3578 ATGGCTAGCTTTGAAAAAGATGAGCAGCCAATGCTGTTAGCATCATTTCCACAACGATCTGATGAACCCGAGGGTTCTAATTTCCGGAGGCTAGTATCAAGGACACGAAGCGCATCAATTTCTATTCCCATGGCCTCCATGGAGCAATATGACAGAGAAGCTAGTCTTGTGGGGCATACTGGTCCACTTCGTAGTGTGAGAAAGTCCCCATTTCCACAGACGAGTGGTCCACTAAATGTTTCCCAAGGAGCTGGAAATCTTTTGCAGCAGAGTAGAGTTGTCAAAGGAAAGAAAGTAGCAGAGAACAAGGCAGAAAATATTTCTACTTTCCGTGGCAAACGTGAAGATCATTGGAATAATGACTATGATAGAAGAAATGAAAACTTACTGAGGTCTGGCCAACTGGGAATGTGTAATGATCCTTACTGTACTACTTGCCCTGCATACTTCAAGGTTGTTCAGCAAGTAAAGCCAAGAACTTTGAATAGATTCGACCCCAAGAATCGCGATGTTCTTTATGGCGATGCGAAGGGCTTTGCTAGAGAAGTTTACTCTTTCTTCTCTTCATGTGTTCCTAGAGTTATGAACCCTCACACTAAAGTTGTACAGAGGTGGAACAAGGTTTTGGCTATTTGTTGCTTGGTAGCAATTTTTGTTGATCCATTATTTTTCTTCTTACTCTATGTGCACAAGGATAATAATTGTATTATTATCAACTGGAAGTTGAAAACAGCACTTGTTGTAATTAGAAGCCTGATTGATTTTATATATTTCTTGAACATTCTTCTCCAGTTTAGGTTGGCTTATGTTTCTCCTGAGTCAAGGGTTGTTGGTGCTGGAGATTTAGTTGACGATCCAAAGAAAATTGCTCTAAATTACCTGCGGGGTTATTTTCTTCTTGATTTATTTGTTGTAATTCCTCTTCCTCAGATAATAATGTTGTTTATCCTACCGAAAAACTTGGGTTCATCAGGAGCAAATTATGCTAAGAATCTTCTGCGTGCAGCGATCCTTGTGCAGTACATTCCCAGATTATACAGGTTTCTGCCTCTGCTAATTGGCCAGTCTTCTACAGGATTTATATTTGAGTCAGCTTGGGGAAATTTCGTCATAAATCTTCTCATTTATATGCTATCTGCGCATGTTGTTGGCTCTTTCTGGTACCTTTTTGGTCTACAGAGGGTTAATCAATGTCTGCGAGATGCCTGCAGTAAGTCTAACATTACTGACTGCATGAAATACATGGATTGTGGCCGTTTACCAAGCAACAGCGCATCAAATCCGTGGGCCAGCAACGAAAATGCCACTGCTTGTTTGAATGCCGCATCTGGCGCTTTTGATTATGGGATCTATGCCAAAGCCGTACCACTTACTATGAAAACCAATGTGATCAACAAATATGTGTATTCGCTGTTTTGGGGCTTCCAGCAAATCAGTACTCTTGCTGGTAATCAAACCCCAAGCTATTTTACGTGGGAAATCCTTTTCACAATGGCCATCGTAGGGCTGGGACTCTTGCTTTTTGCACTCCTCATTGGAAACATACAGAACTTTCTTCAGGCTCTTGGAAAGAGGAGACTAGATATGCAACTTAGAGGCCGTGATGTTGAGCAATGGATGAGTCATCGTCGCTTACCAGAAGATCTAAGAAGGAGAGTACGACAGGCCGAACGGTATGATTGGTCTGCAACAAGAGGGGTGAATGAAGAAATGCTACTAGGGAGAATGCCAGAAGATCTCCAGAGAGACATAAGACGCCATCTCTTCAAATTTATTAAGAAAGTTCGGATTTTTGCCGTGATGGATGAGCCTATCTTAGATGTCATTTGTGAGAGACTAAGACAAAAGATATACATCAAAGGAAGCGATATTTTGTATCAGGGTGGTCTGGTAGAGAAGATGGTGTTTGTTGTGCGTGGAAAATTGGAGAGCATTGGAGAAGATGGGACTAGCTCTATCTTATCCGAAGGGGATGCTTGTGGTGAAGAACTTCTGAGATGGTATCTTGAAAATTCTTCAGTCAGCGCAGATGGTAGAAAAGTAAAACTTAGTGGACAAAGGTTACCACCTAGTAACCGGACAGTAAGGTGTTTAATGAACGTGGAGGCATTTTCACTGCGAGCTGCAGACATTGAAGAAGTCACAAACCTTTTCCCGAGATTCTTGCGGAGTCAACGTGTTCAAGGAGCCCTAAGGTATGAATCACCTTATTGGAGATCCTTTGCCGCAACCCGCATCCAGGTTGCTTGGAGATACAGGATGAAACGACTACATCGTGTTGCTTCAGAATCAGATTAG 2298 0.4208 MASFEKDEQPMLLASFPQRSDEPEGSNFRRLVSRTRSASISIPMASMEQYDREASLVGHTGPLRSVRKSPFPQTSGPLNVSQGAGNLLQQSRVVKGKKVAENKAENISTFRGKREDHWNNDYDRRNENLLRSGQLGMCNDPYCTTCPAYFKVVQQVKPRTLNRFDPKNRDVLYGDAKGFAREVYSFFSSCVPRVMNPHTKVVQRWNKVLAICCLVAIFVDPLFFFLLYVHKDNNCIIINWKLKTALVVIRSLIDFIYFLNILLQFRLAYVSPESRVVGAGDLVDDPKKIALNYLRGYFLLDLFVVIPLPQIIMLFILPKNLGSSGANYAKNLLRAAILVQYIPRLYRFLPLLIGQSSTGFIFESAWGNFVINLLIYMLSAHVVGSFWYLFGLQRVNQCLRDACSKSNITDCMKYMDCGRLPSNSASNPWASNENATACLNAASGAFDYGIYAKAVPLTMKTNVINKYVYSLFWGFQQISTLAGNQTPSYFTWEILFTMAIVGLGLLLFALLIGNIQNFLQALGKRRLDMQLRGRDVEQWMSHRRLPEDLRRRVRQAERYDWSATRGVNEEMLLGRMPEDLQRDIRRHLFKFIKKVRIFAVMDEPILDVICERLRQKIYIKGSDILYQGGLVEKMVFVVRGKLESIGEDGTSSILSEGDACGEELLRWYLENSSVSADGRKVKLSGQRLPPSNRTVRCLMNVEAFSLRAADIEEVTNLFPRFLRSQRVQGALRYESPYWRSFAATRIQVAWRYRMKRLHRVASESD* 766
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g3578 765 MobiDBLite consensus disorder prediction 1 30 - -
Aev05g3578 765 SMART cnmp_10 597 733 IPR000595 -
Aev05g3578 765 Gene3D Jelly Rolls 595 720 IPR014710 -
Aev05g3578 765 CDD CAP_ED 597 723 IPR000595 -
Aev05g3578 765 SUPERFAMILY Voltage-gated potassium channels 197 525 - -
Aev05g3578 765 PRINTS EAG/ELK/ERG potassium channel family signature 493 504 IPR003938 GO:0005249|GO:0006813|GO:0016020
Aev05g3578 765 PRINTS EAG/ELK/ERG potassium channel family signature 261 270 IPR003938 GO:0005249|GO:0006813|GO:0016020
Aev05g3578 765 PRINTS EAG/ELK/ERG potassium channel family signature 561 568 IPR003938 GO:0005249|GO:0006813|GO:0016020
Aev05g3578 765 PRINTS EAG/ELK/ERG potassium channel family signature 467 484 IPR003938 GO:0005249|GO:0006813|GO:0016020
Aev05g3578 765 PRINTS EAG/ELK/ERG potassium channel family signature 511 520 IPR003938 GO:0005249|GO:0006813|GO:0016020
Aev05g3578 765 PRINTS EAG/ELK/ERG potassium channel family signature 378 388 IPR003938 GO:0005249|GO:0006813|GO:0016020
Aev05g3578 765 PANTHER NUCLEOTIDE GATED CHANNEL PROTEIN, PUTATIVE-RELATED 5 762 - -
Aev05g3578 765 ProSiteProfiles cAMP/cGMP binding motif profile. 597 665 IPR000595 -
Aev05g3578 765 Pfam Ion transport protein 205 525 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Aev05g3578 765 Gene3D Helix hairpin bin 524 589 - -
Aev05g3578 765 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 5 762 - -
Aev05g3578 765 SUPERFAMILY cAMP-binding domain-like 525 723 IPR018490 -
Aev05g3578 765 Gene3D - 206 522 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g3578 Aev-Chr5 34875196 34883551 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev05g3578 1 675 Ion Channels AT3G17700 58.174 0.0 760
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g3578 K05391 - ccaj:109789004 1130.93