Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g3575 ATGGCTAATTATGAAAACGATGAGCTGCCGATGCTGTCAGACACAGAAAAGTGTGAATATGATGAGCCGTTGAATACGAAATTGCAAAAATTTTTATCCAGGACACAAAGTGCAATTTCTATTCCAATGAACACCCTGGAATCATATCAGAGAGAAAGTAGCCTTGTTGGACACACTGGTCCACTTCGGAGTGAGAAGAAAACCCCCTTTGTGCAAATGAGTGGTCCACTATATGCTAACCCTAGAACTGAAAATCATTTACAGAGGAGTGTGGTTGCAACAGGAAACAAAGAAGAGGAAAGGAAGACAGAAAATTTTGATAGATTCCGCCGCACAGATTCAGATTACTGGAATAGCAACTATGATAAGAAAAATGAACACTTAATGAGGTCTGGGCAACTGGGAATGTGTAATGATCCTTATTGTACTACTTGCCCTACCTACTTCAAGGCTTCTCAACATAGAAATCCAAAATCTCCGACAATATTTGATCCCAAGTTCCACAATGCTCTTTATGGGGATGCCAAGGGTTTTGCGAGAAAACTTTGGTCTTTCTGCTATTCGTACGTTCCTGGAGTTATAAATCCTCACTCAAAAATTGTACAACGATGGAACCAGATATTGGCCATCATTTGCTTGGTAGCTATTTTTGTGGATCCATTATTCTTTTTCGTACTCTATGTACAGCAGGACTATAATTGTATTGCTATAAACTGGTCGGTGACAACAGCACTTGTTATAGTTAGAAGCTTGAATGATTTTGTGTATTTCTTTAACATTCTTCTCCAGTTTAGGTTGGCTTATGTTTCTCCGGAGTCACGGGTTGTTGGTGCTGGAGATTTAGTTGACCATCCTAAGAAAATTGCTCTTCATTACTTTAAGGGCTATTTTCTTATTGACTTATTTGTTGTATTTCCTCTTCCTCAGATAATGATATTGTTTGTGTTGCCAAAATCCTTTGGGGGAGCAAATCAAGCCAAGAATCTTCTTCGTGCAGCAATCCTAGTGCAGTATATTCCTAAGTTATTTAGGTTTCTGCCACTGTTAATTGGCCAGTCTCCGTCAGGATTTATATTTGAGTCAGCCTGGGCAAATTTTGTAATCAACCTTCTGATCTTTATTCTATCTGGACATGTTGTTGGTTCTTGCTGGTACCTTTTCGGTCTACAGAGGGTTAACCAATGTTTTAGAAATGCCTGCCGCGGCTCTGGCATTCCTGGATGCATGAAATTCATTGATTGTGGGCACGGCCATGATGATGGAAACAATCAACCTGGTCAAACATCAGCTCAGTGGTTCAACAATACTGATGCCATTGCCTGTTTGAATAGCCCTTCCAATGGTACTTTTGCTTATGGGATCTATGAAAATGCTGTACAACTTACTACAGAAACCAGAATGGTCGACAAATACGTATATTCTCTGTTTTGGGGATTCCAGCAAATCAGTACTCTCGCTGGTAATCTAGTCCCTAGCACATTTGTGTGGGAAGTCGTTTTTACTATTGCCATTATAGCATCGGGACTTTTGCTTTTCGCGATTCTTATTGGAAACATCCAGAACTTTCTTCAGGCTCTTGGAAGGAGGAGGCTAGAAATGCAACTTAGAGGCCGTGATGTTGAGCAATGGATGAGTCATCGGCGCCTACCAGAAGATTTAAGAAGGAGAGTACGACAGGCTGAACGGTATTCTTGGGCTGCAACAAGGGGAGTGAATGAAGAAATGCTTATGGAGAATTTACCTGAAGATCTACAGAGAGACATAAGACGTCATCTTTTCAAGTTTGTTAAGAAAGTTCGAATTTTTGCTCTGATGGATGAACCTATCTTAGATGCCATTTGTGAGAGACTAAGACAAAGGACATACATCAAAGGAAGCAAAATTTTGAGTCATGGTGGTCTGGTGGATAAAATGGTATTTGTTGTGCGCGGTAAATTGGAGTGCACTGGAGAAGATGGAAACACACTTCCATTATCTGAAGGGGATGCTTGTGGTGAAGAACTTCTAACTTGGTATCTTGAACATTCTTCTGTAAGCACAGATGGCAGAAAAGTAAGGCTTCCTGGACAAAAGTTGCTTAGCAATAGGACAGTAAGATGCTTAACAAATGTGGAGGCATTTTCGCTCCGCGCTGCAGACCTTGAAGAAGTCACAATCCTTTTCACAAGATTCTTGCGGAGTCCGCGTGTTCAAGGAGTCTTAAGGTATCAATCCTCTTATTGGAGATCCCTTGCAGCAATACGCATTCAAGTTGCATGGAGATACAGACAGAAACGTCTAAGGCGTGCTGATTCCTCAGTTTCAAATTAA 2310 0.4087 MANYENDELPMLSDTEKCEYDEPLNTKLQKFLSRTQSAISIPMNTLESYQRESSLVGHTGPLRSEKKTPFVQMSGPLYANPRTENHLQRSVVATGNKEEERKTENFDRFRRTDSDYWNSNYDKKNEHLMRSGQLGMCNDPYCTTCPTYFKASQHRNPKSPTIFDPKFHNALYGDAKGFARKLWSFCYSYVPGVINPHSKIVQRWNQILAIICLVAIFVDPLFFFVLYVQQDYNCIAINWSVTTALVIVRSLNDFVYFFNILLQFRLAYVSPESRVVGAGDLVDHPKKIALHYFKGYFLIDLFVVFPLPQIMILFVLPKSFGGANQAKNLLRAAILVQYIPKLFRFLPLLIGQSPSGFIFESAWANFVINLLIFILSGHVVGSCWYLFGLQRVNQCFRNACRGSGIPGCMKFIDCGHGHDDGNNQPGQTSAQWFNNTDAIACLNSPSNGTFAYGIYENAVQLTTETRMVDKYVYSLFWGFQQISTLAGNLVPSTFVWEVVFTIAIIASGLLLFAILIGNIQNFLQALGRRRLEMQLRGRDVEQWMSHRRLPEDLRRRVRQAERYSWAATRGVNEEMLMENLPEDLQRDIRRHLFKFVKKVRIFALMDEPILDAICERLRQRTYIKGSKILSHGGLVDKMVFVVRGKLECTGEDGNTLPLSEGDACGEELLTWYLEHSSVSTDGRKVRLPGQKLLSNRTVRCLTNVEAFSLRAADLEEVTILFTRFLRSPRVQGVLRYQSSYWRSLAAIRIQVAWRYRQKRLRRADSSVSN* 770
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g3575 769 Gene3D Jelly Rolls 599 723 IPR014710 -
Aev05g3575 769 Pfam Ion transport protein 206 529 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Aev05g3575 769 SUPERFAMILY cAMP-binding domain-like 529 718 IPR018490 -
Aev05g3575 769 SMART cnmp_10 601 736 IPR000595 -
Aev05g3575 769 Gene3D Helix hairpin bin 528 593 - -
Aev05g3575 769 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 4 766 - -
Aev05g3575 769 SUPERFAMILY Voltage-gated potassium channels 196 529 - -
Aev05g3575 769 CDD CAP_ED 601 717 IPR000595 -
Aev05g3575 769 Gene3D - 205 526 - -
Aev05g3575 769 PANTHER NUCLEOTIDE GATED CHANNEL PROTEIN, PUTATIVE-RELATED 4 766 - -
Aev05g3575 769 ProSiteProfiles cAMP/cGMP binding motif profile. 601 669 IPR000595 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g3575 Aev-Chr5 34860478 34867936 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev05g3575 1 679 Ion Channels AT3G17700 58.661 0.0 783
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g3575 K05391 - gmx:100795427 1253.04