Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g3574 ATGGCTGATTCTGAGAAAGATGAGATACCGATGATGTCAGACACTCATCCGAAACAATCACACGAACCTGTTGATTCTAAATGCCATAGTCCAGTACATAGGACACGAAGTATATCGATTTCTATTCCCTTGATCTCCATGGAATCATATGAACGAGAAAGTAATCTTATGGGACACACGGGTCCCCTGCGGAGTACACGAAAAACTCCATTTAATCAGATGAGTGCTCCATTATATGTTTCCCCTAAACCCGGAACCATTTTCTTGAAGAATATAGCAGTACTTGGGAGCCAAGCAGGGGAAACTAAGACAGAAAAGTTTCCTTCATTCGGAAGCATGGGCGAAAATGATTTGCAGAACAGCTATACCGGCTTAAATGAACATTTACTCAGGTCTGGTCCACTGGGAATGTGCAATGATCCATACTGCACAACTTGTCCAACTTCTTTTAAGGCTACTCAACAAATTAATTCAAAAGCCCAGGGTTTCTTCAATCCCAAGTTTCACAATTCCCTCTATGGGGATGCCAAGTGTTGGGCAAGAAGATTTTCTGATTTCTTGATTCCGTATGTTCCTGGCATCATGAATCCTCATACCAAACTTGTACAACAATGGAACAAATTTTTTGCAATCTGTTGCTTGCTGGCAATCTTTGTGGATCCATTATTTTTCTTCTTGCTCTCCGTGCAGAAGGAACATAAGTGTATTGTTCTAAACTCGACTATGACAACTGTGCTTGTTTTATTAAGAAGCATGAATGATTTTGTGTACTTCCTAAACATTATGCTTCAGTTTAGGTTGGCTTATGTGGCTCCTGAGTCTAGGGTAGTTGGTGCAGGGGAGTTGGTTGACCATCCTAAGAAAATTGCACTGCATTACCTTCACACATATTTTGTTCTCGACTTATTTGTTGTTCTTCCACTTCCTCAGATAATCATATTGTTTGTCCTACCACAAAACTTGGGGTCATCAGGAGCAAACTATGCAAAGAATCTTTTACGTGTCGCTGTTCTTGTTCAGTATATTCCCAGATTGTGTAGGGTTCTACCAATGCTCATTTCTCCTACCGGATTCGTATTTGAGTCAGCATGGGCAAATTTCTTTATAAATCTTCTCACCTTTATGCTTTCTGGCCATTTTGTTGGGTCATGGTGGTACCTTTTCGGTTTGCAGAGGGTTAACCAATGTCTACGAGATGCCTGCAAGAGCTCTCATATTTATGAATGCAACAAGTTCATTGATTGTGGCCATGATGACGATACTAGAAGATATCAAAATGACACAAATTGGGGTCTTTGGAAGAACGATACTATTTCGAATGCTTGTTTTTATGAAGATAATTTTCCTTATGGGATTTATCTTAAAGCTGTCAACCTTACTGCAGAACACGATGTGATCACCAGATATGTATACTCATCATTTTGGGGATTCCAGCAAATTAGTACTCTGGCTGGAAATTTGACCCCAAGCTATTTTGTGTGGGAAGTCCTTTTTACAATGGCCATCATAGGATTGGGACTCTTGCTTTTCGCTCTTCTCATTGGAAACATACAGAATTTTCTTCAGGCTCTCGGGCGCAGGAGGCTAGAAATGTCTCTTAGACGACGTGATGTTGAGCAATGGATGAGTCATCGACGCTTAGCTGAAGATCTAAAAAGGAGAGTCCGACAGGCCGAACGTTATAGCTGGGCTGCAACGAGAGGAGTGAATGAAGAAATGCTTCTGGAGAATTTGCCGGAAGACCTCCAAAGGGACATCAGGCGTCATCTTTTTAAATTCGTTAGGAAAGTTAGAATTTTTGCCTTGATGGATGATCCTATCTTGGACGCGATCTGCGAGAGACTACGGCAAAAGACATACATCAAAGGAAGCAAAATTTTATGTAAAGGTGGTCTAGTAGAGAAGATGGTTTTTGTGGTGCGCGGAAACTTGGATAGCATTGGTGAAGAAGGACATGTAACTTTATCAGAAGGGGATGCATGTGGTGAAGAACTTCTAACATGGTGTCTTGAGCATCCTTCAGTAAACAGAGATGGTAGAAATAATGTAAGGATTCCAAGACAGAGGTTGGTTAGCAATAGGACAGTAACTTGCTTAACAAACGTGGAGGCGTTTTCGCTTCGCGCCGCGGATCTTGAAGAAGTTACAAGCCTCTATGCAAGGTTCCTGCGTAGCCCCCGTGTTAAAGGAGCCATAAGGTATGTATCGCCTTATTGGAGATGCTTTGCAGCAACGCGTATTCAAGTTGCATGGAAGTACAGGAAGAAGCGTCTTAGTCGTGCTGACACTCACACTACTTCACAATCATATGAAACATTACAGATTTAG 2328 0.4158 MADSEKDEIPMMSDTHPKQSHEPVDSKCHSPVHRTRSISISIPLISMESYERESNLMGHTGPLRSTRKTPFNQMSAPLYVSPKPGTIFLKNIAVLGSQAGETKTEKFPSFGSMGENDLQNSYTGLNEHLLRSGPLGMCNDPYCTTCPTSFKATQQINSKAQGFFNPKFHNSLYGDAKCWARRFSDFLIPYVPGIMNPHTKLVQQWNKFFAICCLLAIFVDPLFFFLLSVQKEHKCIVLNSTMTTVLVLLRSMNDFVYFLNIMLQFRLAYVAPESRVVGAGELVDHPKKIALHYLHTYFVLDLFVVLPLPQIIILFVLPQNLGSSGANYAKNLLRVAVLVQYIPRLCRVLPMLISPTGFVFESAWANFFINLLTFMLSGHFVGSWWYLFGLQRVNQCLRDACKSSHIYECNKFIDCGHDDDTRRYQNDTNWGLWKNDTISNACFYEDNFPYGIYLKAVNLTAEHDVITRYVYSSFWGFQQISTLAGNLTPSYFVWEVLFTMAIIGLGLLLFALLIGNIQNFLQALGRRRLEMSLRRRDVEQWMSHRRLAEDLKRRVRQAERYSWAATRGVNEEMLLENLPEDLQRDIRRHLFKFVRKVRIFALMDDPILDAICERLRQKTYIKGSKILCKGGLVEKMVFVVRGNLDSIGEEGHVTLSEGDACGEELLTWCLEHPSVNRDGRNNVRIPRQRLVSNRTVTCLTNVEAFSLRAADLEEVTSLYARFLRSPRVKGAIRYVSPYWRCFAATRIQVAWKYRKKRLSRADTHTTSQSYETLQI* 776
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g3574 775 CDD CAP_ED 599 724 IPR000595 -
Aev05g3574 775 Gene3D Jelly Rolls 597 721 IPR014710 -
Aev05g3574 775 PANTHER NUCLEOTIDE GATED CHANNEL PROTEIN, PUTATIVE-RELATED 4 764 - -
Aev05g3574 775 MobiDBLite consensus disorder prediction 1 33 - -
Aev05g3574 775 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 4 764 - -
Aev05g3574 775 SUPERFAMILY Voltage-gated potassium channels 197 528 - -
Aev05g3574 775 ProSiteProfiles cAMP/cGMP binding motif profile. 599 673 IPR000595 -
Aev05g3574 775 MobiDBLite consensus disorder prediction 1 32 - -
Aev05g3574 775 SUPERFAMILY cAMP-binding domain-like 527 722 IPR018490 -
Aev05g3574 775 Pfam Ion transport protein 205 527 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Aev05g3574 775 Gene3D Helix hairpin bin 527 591 - -
Aev05g3574 775 Gene3D - 202 524 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g3574 Aev-Chr5 34852948 34857377 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev05g3574 2 676 Ion Channels AT3G17700 60.352 0.0 810
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g3574 K05391 - gmx:100795955 1160.59