Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g3570 ATGAGTGGTTCGACGACGAGGAAAAAGGTGCAGAAGAAGTGCAAGATCAGAGGGTACAACCTCAAGGTCGACGCCCTCGACGAGATCCTCTCCTACGTCTCTCGATTCCATGGCCCCACCCAGGACGACGCCACCGATCTCCTCCTCGATTTCCTCGAAACTGAATCTCTGAAATCGACCATAATCGACAGGGAGACGGTGCACCGTGCTGTGGTCCGGCTGTTGAAAGCAGACGAAGCGGTGGAGGGGTGCTTCGATGCCGTGTCCACCGCCGGTGCTTCCGCCATTCGCGTCGTCGATGCGTTTGTGGTCCCCAAATATCGATACGATCCTATCAGGAAGCTTTTCTACGAACACACAGGAAGCTTGCCTATTCATGGGGAAGCATCAGCTAAAGCAACTCTGTACAGGGATAGGTTTCTGTTGTTGTCCCAGAGGCTCTCTCGTGACCAGCATTTTTCAAGGCCTGCTTTTGATTCAGAATTTTCCCATTTTGGGAGCTGCGAGATATCTCCTATCCAATCCCTGGTTGGACAAACTGGTAGAAAATGGGTAATGGGAGTAATATCCCAGCTTGAAGATGGACATTTTTATTTGGAAGATCTTACCGCTTCAGTTGAAATTAATTTATCTAATGCTATATCCTTTTGTATAATTATTGATTATTATTGTTATTGTTGTTTTTGTTGGTGGTGTTGCAAGAGCTCCATATTAATGATGTTATTTAAGCATGTTTGTAATGCCATCAGTTTCTTTGACAAGCAATACAAGATAACCACAGGATTCTTTTCAGAGAACACCATAGTTGTGGCTGAAGGCGAGATGCTAGTGGAGGGTATTTTTCAGGTTTTAACATGTGGGTTTCCCCCATTAGAAGATAGGGATAAGTCACTTAAACAATTTGCAGGCCATGACTTTTTTGGTGGTGGCACCTTAACAAGAGAAGAAACTATCAGACTGGCTGATTTGGAGAAAGAAGCAGTCAATGACATGTTTGTTATTCTGTCAGATATTTGGCTAGACAGCGAAGAGGCTCTGGGAAAGCTAGAGATTGTACTGAACGGTTATGAGGGTGTGGAAGTGGTTCCTTCCTTATTTGTTTTCATGGGAAACTTCTCTTCTCATCCATGTAACCTTTCCTTCCATTCTTATTCAAGCCTTAGGTTGCAGTTTGGAAAGCTAGGGCAGATGATTGCTGCCCATCCTCGGCTAAAAGAGCACAGTCGATTTCTGTTTATTCCAGGTCCTGATGATGCAGGTCCTTCAACGGTTCTTCCTAGGTGTGCTCTACCAAAATATTTGACAGAGGAGCTCCAAAAGCATGTACCCAATGCTATATTTGCAAGTAACCCATGCAGGATCAAGTTCTATACTCAAGAAATTGTATTTTTCCGGCAGGATATGCTGTATAGAATGCGTCGATCTTGTTTAATGCCACCTTCTATGGAAGAAACTAATGATCCGTTTCAGCATCTTGTTGCTACCATAACCCATCAGAGTCATCTCTGTCCACTCCCTCTAACTGTACAACCAATCATCTGGAACTATGACCACTGCCTTTATCTTTATCCAACTCCACACACGATCGTCTTGGGAGACAGAAGTCAGCAGAAGGCATTCAAGTACACAGGAATCACTTGTTTTAATACGGGTTCCTTCTCAATTGACAGTACATTTGTTGCATACCGTCCTTGCTCACAGGAAGTTGAATTGTCAGCATTGTAA 1725 0.4412 MSGSTTRKKVQKKCKIRGYNLKVDALDEILSYVSRFHGPTQDDATDLLLDFLETESLKSTIIDRETVHRAVVRLLKADEAVEGCFDAVSTAGASAIRVVDAFVVPKYRYDPIRKLFYEHTGSLPIHGEASAKATLYRDRFLLLSQRLSRDQHFSRPAFDSEFSHFGSCEISPIQSLVGQTGRKWVMGVISQLEDGHFYLEDLTASVEINLSNAISFCIIIDYYCYCCFCWWCCKSSILMMLFKHVCNAISFFDKQYKITTGFFSENTIVVAEGEMLVEGIFQVLTCGFPPLEDRDKSLKQFAGHDFFGGGTLTREETIRLADLEKEAVNDMFVILSDIWLDSEEALGKLEIVLNGYEGVEVVPSLFVFMGNFSSHPCNLSFHSYSSLRLQFGKLGQMIAAHPRLKEHSRFLFIPGPDDAGPSTVLPRCALPKYLTEELQKHVPNAIFASNPCRIKFYTQEIVFFRQDMLYRMRRSCLMPPSMEETNDPFQHLVATITHQSHLCPLPLTVQPIIWNYDHCLYLYPTPHTIVLGDRSQQKAFKYTGITCFNTGSFSIDSTFVAYRPCSQEVELSAL* 575
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g3570 574 PIRSF DNA_pol_epsilon_2 1 232 IPR016266 GO:0003677|GO:0006261|GO:0008622
Aev05g3570 574 PIRSF DNA_pol_epsilon_2 240 574 IPR016266 GO:0003677|GO:0006261|GO:0008622
Aev05g3570 574 Gene3D - 1 73 - -
Aev05g3570 574 PANTHER DNA POLYMERASE EPSILON SUBUNIT B 7 573 IPR016266 GO:0003677|GO:0006261|GO:0008622
Aev05g3570 574 Pfam DNA polymerase alpha/epsilon subunit B 332 537 IPR007185 GO:0003677|GO:0006260
Aev05g3570 574 Pfam DNA polymerases epsilon N terminal 7 71 IPR024639 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g3570 Aev-Chr5 34825511 34830404 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev05g3570 17 531 Core DNA Replication Machinery Family AT5G22110 66.214 0.0 690
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g3570 K02325 - qsu:112038614 894.034