Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g3568 ATGTGTAGTAGAGGACATTGGAGGCCGGCTGAGGATGAGAAGCTTAGGGAGTTGGTGGAACGATACGGACCTCATAACTGGAACGCCATAGCTGAAAAGCTTCGAGGAAGATCAGGGAAAAGTTGCAGGTTGAGATGGTTCAACCAATTAGACCCAAGAATAAACAGAAGCCCTTTCACAGAGGAAGAAGAGGAACGCCTCATAGCTTCCCACAAGCTTCATGGGAACAGATGGTCAGTGATTGCCCGCCACTTCCCTGGAAGAACTGACAACGCTGTTAAGAATCATTGGCATGTTATGATGGCTAGGCTTCGCAGAGAAACCTCTAAACTTACTAACTATGCCAATACTAAAACTCATCATCAATTTCATCATAGACCACCCACCACAATTTTTTCTACTCCAATTATTCCGAATCTTGTTCTTGTTGAGGAGGATCATCATCATCATCGTAATTACTTTGACAAGAAAAGTAATATTGAAAAGTATAGTAGTAGTAGTTTCCCCGCAGCTAGTGTCACAGCATATGGTGCATTCCAATTTCCCAACAAGTTTTATCATCATCATCACTTTCAAGCTCCTCCAAGTTCTTGTGCCACAATGCTTCAAGATAAAAAAACTGAATCATCAATTGAGTTCTACGATTTTCTGCAAGTAAACAACAATAATAAGACCGAATCCAACGCAAAAAGTGAAGTCACAAACAACAATATTATTGCAAGAAGAGATGATGAGGAAGTCAATCAAGATGAGATGATGAAGAACAACAATGATGGCAATAATGTTCCATTCATTGATTTTTTGTCTACTCGAAGAAGCTCCTAA 825 0.4012 MCSRGHWRPAEDEKLRELVERYGPHNWNAIAEKLRGRSGKSCRLRWFNQLDPRINRSPFTEEEEERLIASHKLHGNRWSVIARHFPGRTDNAVKNHWHVMMARLRRETSKLTNYANTKTHHQFHHRPPTTIFSTPIIPNLVLVEEDHHHHRNYFDKKSNIEKYSSSSFPAASVTAYGAFQFPNKFYHHHHFQAPPSSCATMLQDKKTESSIEFYDFLQVNNNNKTESNAKSEVTNNNIIARRDDEEVNQDEMMKNNNDGNNVPFIDFLSTRRSS* 275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g3568 274 PANTHER MYB-RELATED PROTEIN A-LIKE 1 273 - -
Aev05g3568 274 Gene3D - 4 55 - -
Aev05g3568 274 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 1 50 IPR017930 -
Aev05g3568 274 ProSiteProfiles Myb-like domain profile. 51 101 IPR001005 -
Aev05g3568 274 Pfam Myb-like DNA-binding domain 7 67 - -
Aev05g3568 274 CDD SANT 7 48 IPR001005 -
Aev05g3568 274 ProSiteProfiles Myb-like domain profile. 1 50 IPR001005 -
Aev05g3568 274 SUPERFAMILY Homeodomain-like 4 97 IPR009057 -
Aev05g3568 274 Gene3D - 57 127 - -
Aev05g3568 274 PANTHER MYB PROTEIN-RELATED 1 273 - -
Aev05g3568 274 CDD SANT 58 101 IPR001005 -
Aev05g3568 274 SMART sant 55 103 IPR001005 -
Aev05g3568 274 SMART sant 3 52 IPR001005 -
Aev05g3568 274 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 51 105 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g3568 Aev-Chr5 34806700 34808949 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev05g3568 1 274 MYB Transcription Factor Family AT1G17950 49.315 5.49e-80 240
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Aev05g3568 Myb_DNA-bind_6 1.2e-16 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g3568 K09422 - gmx:100811746 297.745