Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Aev05g3555 | ATGTTAGGCAGTAACAACAACATAGCTCCCACCACTTCCGAGCCTTTGCCCAGTGCTGATAATAACAATAATGCCACTGCGACCAATAAAAGGAAGAGAAGACCCGCCGGAACACCAGATCCAGATGCAGAGGTGGTGTCTCTATCACCAAAGACGCTGCTGGAATCAGATCGATATGTGTGTGAGATCTGCAACCAGGGGTTCCAGAGGGACCAGAACCTGCAGATGCACAGGAGAAGGCACAAGGTGCCGTGGAAGCTTCTCAAGAGGGAGACGCCAGTGGTGAGGAAGAGGGTGTTCGTGTGCCCGGAGCCCACCTGCCTGCACCACCACCCCTCCCATGCACTCGGCGACCTCGTCGGCATCAAGAAGCACTTCCGCCGCAAGCACAGCAACCACAAGCAGTGGCTCTGCCACCGCTGCTCCAAGGCCTACGCCGTCCAGTCCGATTACAAGGCCCACCTCAAGACTTGCGGCACTCGCGGCCACTCCTGCGATTGCGGCCGCGTCTTCTCCAGGGTGGAGAGCTTTATTGAGCACCAAGATGCTTGCAACACGGGAAGGCTTAGAACAGAATCTCATCATCATCCAATGCAGCAGCAGCAACAGCAGCAACAACAAGGTGCATGCTTATCTAGAACAGCTTCAAGTCCAAGCCCTTCAAGTGAAACAAATTTCAGCACATGTCCTAATAATTGGCCACCACCAACAACAACAAACCTTGTTGTCATGCCAAAAAAACCAACACCAACAAAGGAACCAACATTCTTCAACATCACTACTCCCAATAATAATGTTGAAGCCTCATTATTCAAGATCAACAACAACAAACTCCACCACCACCCCAACTTGGAGCTCCAACTCTCAAACACCATCACTTCAAACCCCAACATGGAATTGCCTGCATCAGCATCAATATCGCTATCACCACCAAAGAGAGGTAATAACAATAACAATAACAACTCCACTACTCATCAGTTGCAGCTATCAATTGGTACTACTGCCACGTCATCAGATATGAGTGAGAAGAATGAGTCAAACGCCAACAAGAACTCATCACCGAAGGAAAGCAGCAATAGTAGCCATGAGAAGCCAACAGCAACAAGCATGGCAATAAGGGTTCAAGAGCAAGCGAGGGAGCAACTAAGGATAGCAATGGCTGAAAAAGCCTATGCTGAGGAAGCGAGAAAGCAAGCAAAGAGGCAGATCGAGATTGCTGAGAATGAGTTCAACAATGCAAAGAGGATAAGGCAGCAAGCTCAAGCTGAACTTGAGAAGGCTTATGCATTAAAGGAGCATGCGATGAAGCAGATCAACTCCACCATGCTCCAAATTACGTGCCATGCTTGCAAACAACAATTCTCTCAAGCAAGGACGACGACGGGGACGACAACAACAGCAGTAGCTTCGCCCGACGAGAATTTCTCATCGGTGCTAAGCTACATGTCATCTGCTATCACAATTGAAGCCGGCGAAGTTATTGAGAATGAGGATAATGGAATCAAAGATCATCATCATCATCATGGGAAAACATGTACAACTAACTCTTAG | 1551 | 0.4855 | MLGSNNNIAPTTSEPLPSADNNNNATATNKRKRRPAGTPDPDAEVVSLSPKTLLESDRYVCEICNQGFQRDQNLQMHRRRHKVPWKLLKRETPVVRKRVFVCPEPTCLHHHPSHALGDLVGIKKHFRRKHSNHKQWLCHRCSKAYAVQSDYKAHLKTCGTRGHSCDCGRVFSRVESFIEHQDACNTGRLRTESHHHPMQQQQQQQQQGACLSRTASSPSPSSETNFSTCPNNWPPPTTTNLVVMPKKPTPTKEPTFFNITTPNNNVEASLFKINNNKLHHHPNLELQLSNTITSNPNMELPASASISLSPPKRGNNNNNNNSTTHQLQLSIGTTATSSDMSEKNESNANKNSSPKESSNSSHEKPTATSMAIRVQEQAREQLRIAMAEKAYAEEARKQAKRQIEIAENEFNNAKRIRQQAQAELEKAYALKEHAMKQINSTMLQITCHACKQQFSQARTTTGTTTTAVASPDENFSSVLSYMSSAITIEAGEVIENEDNGIKDHHHHHGKTCTTNS* | 517 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Aev05g3555 | 516 | MobiDBLite | consensus disorder prediction | 295 | 369 | - | - | |
Aev05g3555 | 516 | SUPERFAMILY | beta-beta-alpha zinc fingers | 56 | 82 | IPR036236 | - | |
Aev05g3555 | 516 | MobiDBLite | consensus disorder prediction | 1 | 48 | - | - | |
Aev05g3555 | 516 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 61 | 81 | IPR013087 | - | |
Aev05g3555 | 516 | PANTHER | PROTEIN INDETERMINATE-DOMAIN 16-LIKE | 5 | 489 | - | - | |
Aev05g3555 | 516 | MobiDBLite | consensus disorder prediction | 196 | 245 | - | - | |
Aev05g3555 | 516 | Coils | Coil | 382 | 437 | - | - | |
Aev05g3555 | 516 | MobiDBLite | consensus disorder prediction | 190 | 262 | - | - | |
Aev05g3555 | 516 | MobiDBLite | consensus disorder prediction | 1 | 31 | - | - | |
Aev05g3555 | 516 | ProSiteProfiles | Zinc finger C2H2 type domain profile. | 59 | 81 | IPR013087 | - | |
Aev05g3555 | 516 | Pfam | Zinc finger, C2H2 type | 59 | 81 | IPR013087 | - | |
Aev05g3555 | 516 | PANTHER | OS03G0310200 PROTEIN | 5 | 489 | IPR039288 | GO:0009630 | |
Aev05g3555 | 516 | SMART | c2h2final6 | 100 | 130 | IPR013087 | - | |
Aev05g3555 | 516 | SMART | c2h2final6 | 59 | 81 | IPR013087 | - | |
Aev05g3555 | 516 | SMART | c2h2final6 | 136 | 163 | IPR013087 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Aev05g3555 | Aev-Chr5 | 34706333 | 34708975 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Aev05g3555 | 26 | 226 | C2H2 Transcription Factor Family | AT2G01940 | 77.561 | 5.48e-110 | 332 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | C2H2 | Aev05g3555 | zf-C2H2 | 0.005 | CL0361 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Aev05g3555 | K25871 | - | gmx:100800187 | 589.726 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Aev03g3462 | 03 | 31917616 | 31919648 | Aev05g3555 | 05 | 34706333 | 34708975 | PCT |