Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g3554 ATGGATGGGGATAATGGTCTTAACATACGCAATTGGGGCTACTATGAACCTGCTACCTCCTTCAAGAGCCATCTGGGGCTCCAGCTAATGTCTTCGATGCCCGAAAAGCCTCTGCTTGGACGTAATGCTGCGGTTTTGTCTGGTGCTAATGGGGCCTATCATCATAGGGACATTGGGATGCCCCAAACTTCGTACCCTATGGATTACATGAGGGATGCTTGGATTAGCCAGAGGGAGAAGTTTATGAATATGATACCTACAAACCCGAGTTATGGTGGTATTCCGGAGACTTCTTCAGCTCATCATATGCAGATGATTCCGCCGCCTGAGTTGACGAAGGAAGAAAGGCCAGTTGAAGAGGCTGCACCTGTTGTTGAGAAGCCTACTGGCACTGGTAAGAAGAGGCAGGGGCCAAAGGTGCCAAAATCCCCAAAGGCAAAGAAGCCCAAGAGGGGGCCTCGTGTGCCAAAGGATGAGAACGCTCCTTCAGTTCAACGAGCAAGGGTTCCGAAGAAAACAACTGAAATCGTGATTAACGGGATTGATATGGATATATCCAGCATTCCAATTCCGGTCTGTTCATGCACCGGGTCACCTCAACAGTGTTACAGATGGGGCTCTGGTGGGTGGCAGTCTGCATGTTGCACGACAGGCATGTCTATGTATCCTTTACCTATGAGTACAAAGCGGCGCGGTGCTAGGATAGCTGGAAGGAAAATGAGTATAGGAGCATTTAAGAAAGTTTTAGAGAAACTTGCAGCGGAGGGATATAACTTTTCTAATCCGATTGATTTGAGGACTTATTGGGCAAAACATGGCACCAATAAGTTTGTTACTATCAGGTAG 846 0.4775 MDGDNGLNIRNWGYYEPATSFKSHLGLQLMSSMPEKPLLGRNAAVLSGANGAYHHRDIGMPQTSYPMDYMRDAWISQREKFMNMIPTNPSYGGIPETSSAHHMQMIPPPELTKEERPVEEAAPVVEKPTGTGKKRQGPKVPKSPKAKKPKRGPRVPKDENAPSVQRARVPKKTTEIVINGIDMDISSIPIPVCSCTGSPQQCYRWGSGGWQSACCTTGMSMYPLPMSTKRRGARIAGRKMSIGAFKKVLEKLAAEGYNFSNPIDLRTYWAKHGTNKFVTIR* 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g3554 281 PANTHER PROTEIN BASIC PENTACYSTEINE2-LIKE 1 281 - -
Aev05g3554 281 SMART GAGA_bind_2 1 281 IPR010409 -
Aev05g3554 281 PANTHER - 1 281 IPR010409 -
Aev05g3554 281 MobiDBLite consensus disorder prediction 110 171 - -
Aev05g3554 281 Pfam GAGA binding protein-like family 1 281 IPR010409 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g3554 Aev-Chr5 34696280 34697125 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev05g3554 1 281 BBR or BPC Transcription factor family AT2G01930 53.846 8.88e-99 289
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BBR-BPC Aev05g3554 GAGA_bind 2.2e-111 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g3554 - - gmx:100784091 498.049