Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g3522 ATGGAGAGGGATTTTTTTGGTTTGAGCTCCAAAAATGGTGCAGGGAATAGTATGAAAGAGGATGCTGCTAGCAAAACAAGAGACCCAGTGAGGGGTTCAGGAATGCAGTGGTCATTCTCAAACAAGGCCTCATCAGTGCCTCAGTTCCTATCCTTCAAGACCATTCCAGAAGATGGTCAGAGAAACACTATTCTTGATCCAATAGCTTCATCTGGATACATGACCATATCAACTAAGGATTCTTTTGAAACTGACCAGAAACCATTCTTGAGTGTGTTCCAGAAAAATTTGTCTATAGACAAGCAAGCAGGAAACAATAATGGAATGACAGTGTATCCTCTTCAATGTTCTGATGCACATTCGGTTAGCAGACAGGAAGCAAGAATATTTTCGGTTTCCAACCAATCGAATCAAGTGAGTCCTGTTCTTCAATCTAACCTTGCTACTACTGGACAAAACATGGTCACTTCAGTCATAAAACCACAACCTCTTGGTTTCAAATCGTTTGGCACACCTGTATCTGTTCTTCCACCTATAGGTTCCATTGTTGGCTCTACTGACTTAAGGAGTTGTTCCAAATTCTCAGGCACACCTGCTCAGTTGACCATTTTCTATGCTGGTTCAGTATGTGTTTATGATGATATATCTCCTGAGAAGGCCCAGGCTATCATGTTACTTGCTGGAAATGGTTCTACTCCAAGTCAGAACAAGACAGTTTCCACACCTAAATTGCAGCCAGTGATCCCTATTCCCTCCAAAGATGATGGTTTCATTATAAGCCAATCCTACCCATCACCCGTGCCAAGCCCTCTTCCGGTGACCTCTCTTGCCGGTTCACAGCCTGGGGGAGGATCTTCTAGCAACAATGAAATCACAATCATAAGGCCAGTAGGACCTTCAAATACTACCTCTACTAACCATTTGGAATCTCCTAATGTTGTTGCTTCTGCAGCTACAAAAATGGTTAAAACAGTAGGCTTGCCTCAGGCACGCAAAGCATCCTTGGCTCGGTTTTTGGAGAAGCGAAAGGAAAGGGTCATGACCACATCTCCATACAATGTGATCAAGAAATCACCTGAATGCAGCACTCCTGGATCAGAAAGTGTTAGTTTCTCCATCAATTCCTCTGGTTCCTGTCCTCTACCAGCTGTTAACTAG 1158 0.4335 MERDFFGLSSKNGAGNSMKEDAASKTRDPVRGSGMQWSFSNKASSVPQFLSFKTIPEDGQRNTILDPIASSGYMTISTKDSFETDQKPFLSVFQKNLSIDKQAGNNNGMTVYPLQCSDAHSVSRQEARIFSVSNQSNQVSPVLQSNLATTGQNMVTSVIKPQPLGFKSFGTPVSVLPPIGSIVGSTDLRSCSKFSGTPAQLTIFYAGSVCVYDDISPEKAQAIMLLAGNGSTPSQNKTVSTPKLQPVIPIPSKDDGFIISQSYPSPVPSPLPVTSLAGSQPGGGSSSNNEITIIRPVGPSNTTSTNHLESPNVVASAATKMVKTVGLPQARKASLARFLEKRKERVMTTSPYNVIKKSPECSTPGSESVSFSINSSGSCPLPAVN* 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g3522 385 ProSiteProfiles Tify domain profile. 194 229 IPR010399 -
Aev05g3522 385 SMART tify_2 194 229 IPR010399 -
Aev05g3522 385 MobiDBLite consensus disorder prediction 270 289 - -
Aev05g3522 385 Pfam Jas motif 328 352 IPR018467 -
Aev05g3522 385 MobiDBLite consensus disorder prediction 1 32 - -
Aev05g3522 385 PANTHER JASMONATE ZIM-DOMAIN PROTEIN 264 385 - -
Aev05g3522 385 Pfam tify domain 197 228 IPR010399 -
Aev05g3522 385 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 264 385 IPR040390 -
Aev05g3522 385 MobiDBLite consensus disorder prediction 358 385 - -
Aev05g3522 385 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 35 265 IPR040390 -
Aev05g3522 385 PANTHER JASMONATE ZIM-DOMAIN PROTEIN 35 265 - -
Aev05g3522 385 MobiDBLite consensus disorder prediction 272 289 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g3522 Aev-Chr5 34415004 34420062 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev05g3522 35 369 Tify Gene Family AT3G17860 40.909 3.15e-52 175
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Aev05g3522 tify 2.2e-18 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g3522 K13464 - gmx:100807288 485.337