Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g3517 ATGTGGATGGTGGGTTACAATGAAGGTGGTGGTGGTGAGCATCATCACCACCATCATTTAAACATGGTTGCTGATCATCATCCATTATTCAATGGAAGGAAGAACAACAACAATAATAATAATAATAAATTTAGACCTCTCATTCCTAGGCCAATGACTTCCTCCCCTAATAATAACTACTCTCCAACAACAACAACTCCAACTCCATGCTTAAGCCGCAACAATATTCAGGGCAACGATTTCTTTTCACACCACCACCAGCATCACCATCACCATCTCGTAGTGGGAGAAGAGAAGAAGAGTAGTGGTAGGAGTGGAGGAGGAGAAGTGGTGAGCTCATCATCAAGGTGGAATCCTACGGCGGATCAGGTGAGAGCACTGGAGGAGCTGTACAGAAGAGGGATAAGGACGCCGTCAGCGGAGGAGATACAGAGGATAACGGGAGAGCTGAGAAGGATGGGGAAGATAGAAGGCAAGAATGTGTTCTACTGGTTTCAGAATCATAAGGCCAGAGATAGGCAAAAGCGTCGCCGCCAAATGATGCACCACCTCCAATCACCTTCTTCTAATCCTCTCAACACTCATTTTGATGCTTTACATCACAAGAAAGATTCAGCTGCAAATAGAAGGAGAGTGCATCAAGTTGAACAGACCAAGAACTGCCCACTCCCTACAAACTCCACTACTCTTCCAGAGACACAGGAATCGGTTTCAATAGAAAGGGCAGCAAAAGCAGATGGATGGGTCCAATTCGATGGATCAGAATTAGAACAAGAACAAGAAGAAGAAGAAGAAGAGCAGAGCAGAAACTTTATGGACAGGAATGGCACGTGGCGCATGTTGTTGCAATGTCCTGTCACCAACCTCATAAACACAACAACAACAACATCATTAATGGACCCAAATAATCTCATTCACACCCGTGATCATCATCTCTCCTTCTTTGCCTTAACTCATCACACTCAAGAACATCATCAACAACACAACAACAACATCAACAACAACAACCACTTTGTGGAACCTCAACCAGCAGCAGCACCAACCCTTCAACTTTTCCCACTAAGGAGTGGTGATGTTGATCACCACAAACAGACACACATATCAGAATCAGATATCAATGCCAATAACTTCACCCCAACCCAATTTTTTGAGTTTCTTCCCCTCAACAACAACTAA 1176 0.4405 MWMVGYNEGGGGEHHHHHHLNMVADHHPLFNGRKNNNNNNNNKFRPLIPRPMTSSPNNNYSPTTTTPTPCLSRNNIQGNDFFSHHHQHHHHHLVVGEEKKSSGRSGGGEVVSSSSRWNPTADQVRALEELYRRGIRTPSAEEIQRITGELRRMGKIEGKNVFYWFQNHKARDRQKRRRQMMHHLQSPSSNPLNTHFDALHHKKDSAANRRRVHQVEQTKNCPLPTNSTTLPETQESVSIERAAKADGWVQFDGSELEQEQEEEEEEQSRNFMDRNGTWRMLLQCPVTNLINTTTTTSLMDPNNLIHTRDHHLSFFALTHHTQEHHQQHNNNINNNNHFVEPQPAAAPTLQLFPLRSGDVDHHKQTHISESDINANNFTPTQFFEFLPLNNN* 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g3517 391 SMART HOX_1 112 179 IPR001356 GO:0003677
Aev05g3517 391 MobiDBLite consensus disorder prediction 86 117 - -
Aev05g3517 391 PANTHER WUSCHEL-RELATED HOMEOBOX 1-RELATED 66 390 IPR044555 GO:0003700|GO:0099402
Aev05g3517 391 SUPERFAMILY Homeodomain-like 114 183 IPR009057 -
Aev05g3517 391 PANTHER WUSCHEL-RELATED HOMEOBOX 1-RELATED 66 390 - -
Aev05g3517 391 MobiDBLite consensus disorder prediction 174 193 - -
Aev05g3517 391 CDD homeodomain 116 176 IPR001356 GO:0003677
Aev05g3517 391 MobiDBLite consensus disorder prediction 34 69 - -
Aev05g3517 391 Pfam Homeodomain 114 174 IPR001356 GO:0003677
Aev05g3517 391 ProSiteProfiles 'Homeobox' domain profile. 110 175 IPR001356 GO:0003677
Aev05g3517 391 Gene3D - 114 182 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g3517 Aev-Chr5 34391742 34395705 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev05g3517 1 390 Wox Gene Family AT3G18010 32.401 1.04e-39 143
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Aev05g3517 Homeodomain 2.8e-17 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g3517 - - adu:107490490 259.225