Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g3470 ATGGCTGTTGTGACAGAACAGATGAAATGGAGAAGACACAGAAACCACTTAAGCCACCCCATCTCAGAATCTGATCCAACCCCACAAATCCCTTCCATAATCCAATCCACAAGGTGCAAATCCACCTTATCCTCTCTCCTTTTATCCACTTTCTCCAACAACACCACCACCACCAATAATGAAACCGCACATTCCAATGGCCACAACAGAAAGAAAAAGAACAACAGCAACAATGGCAACAGTAACTTCTCTGCAGCAACATTCAGAGGGCTTGGTTGCACTGCTGGTGCATCACAGAAAGTTTCAGTTCCAGATATGATTCGATCCTCTTCTGATTGGCAAGAGAACAAGAAAAGCAGGAAAAATAAGAAGAAGAATAAGCAGAGAAGAAGGAACAGTGAAAAGAGCAACAGAGCATATCATAATGGGGTTGTTGTTGTTGATGGTTCTTCATCTTCTTCTGCTACATGTGTGGATTTTCAAGATGTTTGGTGTGGCCCTGGAATTGGGTTCTCAGCTGATTCTGCTGCCTCTGTGGATTGTGTTGTGGCAAGGAGGAATGTGTCTTCAAGAGTTAAACTTGATGCTGTGGAGAGGGTAACACACAGGGAGCGCCTGCCACCGTATTTGGGAAGGCGCACTATAAACACAAGCTTCTCTTTTCTGGATGATGATCCAGACATTTTCGCAGCACGCCCTGGTTCGGAGTATTTTACAGCTGGTAGAAACTATCGCCACATTCTGCGTCCTTCCCCTGATGGTCTTGCTGAGATAATGATCCTTCAAGAAAGACTAATAATGGGGGGAAGATTAAATTCACATGACCAATTTAGAGAGTGGAGACTTGATGTTGATGACATGTCGTATGAGCAATTGCTTGAGCTGGGTGAGAGAATAGGCTATGTGAACACTGGACTGAAAGAAGATGAAATGGGACACAACATAAGGAAAATTAAGCATGTAATTTCACATGATACATCAAAGCTTCCAACAGACAAAAAGTGCAGCATTTGTCAGGAGGAGTATGAAGCTGATGATGAGATTGGGAGGCTAAATTGTGAACACAACTATCACTTTCTGTGTATAAAACAATGGCTTGTGCATAAGAATTTCTGTCCAGTTTGTAAGCAAGAAGTTGTGGTTCGACACTGA 1152 0.4288 MAVVTEQMKWRRHRNHLSHPISESDPTPQIPSIIQSTRCKSTLSSLLLSTFSNNTTTTNNETAHSNGHNRKKKNNSNNGNSNFSAATFRGLGCTAGASQKVSVPDMIRSSSDWQENKKSRKNKKKNKQRRRNSEKSNRAYHNGVVVVDGSSSSSATCVDFQDVWCGPGIGFSADSAASVDCVVARRNVSSRVKLDAVERVTHRERLPPYLGRRTINTSFSFLDDDPDIFAARPGSEYFTAGRNYRHILRPSPDGLAEIMILQERLIMGGRLNSHDQFREWRLDVDDMSYEQLLELGERIGYVNTGLKEDEMGHNIRKIKHVISHDTSKLPTDKKCSICQEEYEADDEIGRLNCEHNYHFLCIKQWLVHKNFCPVCKQEVVVRH* 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g3470 383 MobiDBLite consensus disorder prediction 52 83 - -
Aev05g3470 383 SUPERFAMILY RING/U-box 328 381 - -
Aev05g3470 383 Pfam Ring finger domain 334 376 IPR001841 -
Aev05g3470 383 SMART ring_2 335 375 IPR001841 -
Aev05g3470 383 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 311 382 IPR013083 -
Aev05g3470 383 MobiDBLite consensus disorder prediction 120 134 - -
Aev05g3470 383 ProSiteProfiles Zinc finger RING-type profile. 335 376 IPR001841 -
Aev05g3470 383 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RNF165 3 383 IPR045191 GO:0061630
Aev05g3470 383 MobiDBLite consensus disorder prediction 104 140 - -
Aev05g3470 383 PANTHER C3HC4-TYPE RING ZINC FINGER PROTEIN 3 383 - -
Aev05g3470 383 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g3470 Aev-Chr5 34027668 34030525 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev05g3470 4 290 C3H Transcription Factor Family AT1G73760 38.667 1.55e-46 159
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g3470 - - gmx:100818517 441.039
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev05g3470 05 34027668 34030525 Aev05g3470 05 34027668 34030525 ECH