Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g3457 ATGAACTTATTCAAGTGCTGCTTCTGTAGCACTTCTTCTAACAGATTTCCCAGGGAGAAACACTTGAATTGGAAAATCTTCCCATACAAGGAACTTGCAAAAGCCACAGAAAATTTTGATCAGTGTCATTGTCTGGGAAAAAGAGGCTTTGGCGCAGTATATTATGGCAAACTTAAAGATGGGCGCGAGATAGCAGTCCAATGCTTTCATGATGACAAACACCACATATTTCAACACTTCATCGAAGAGCCTGTGATCTTGAATTACTTGCCACACAAGAACCTGGTGTCAGTTTACGGTTTTACCTCTCTTGACAATGAATCCCTGTTAGTACATGAATACCTCTCAAATGGAACTCTTGCTTCATATTTTCAAGGTGAATTAGAAGAAAGCAGCAATTTACCTTGGCGAACCCGATTGGATATTGCCATTGGTGCTGCAAATGCTTTGTATTATCTTCACTGTTACGGCATCATCCACCGTGACTTGAAGTCCAGCAACATTCTTCTTGATAAGAATTTTTGTGCCAAAGTTGCAAACTTCCACCTATCACGAAAACTTCCAAGAGGAGTTGCTACCCATGTGACAAGTGATATCATAGGAACATGTGGTTACATAGACCCAGAATATGTGTCACATGGCAGGCTTAGTGTCAAAAATGATGTTTATAGCTTTGGGGTGGTGTTGTGTGAGCTTATATCATCCAAGCTTGAAAAAGATTTGGTCTGCAGGGAAGAAGATAGTATTGCTAACTTTATTGGAAGAAAAATTGAAAACCAAGCATTGGAGGAGCTTTTGGATCCAAGACTCGGCTTCAAATTTGACCATAAGATCAAGCAGATGATGACTGCAGTGGCAGAGCTTGCATTTCAGTGCTTGCAGTGTCCGCAAGTACTAAGGCCACACATGGAACAAGTGCTAGATACTCTCCAAGGCATAAGAGAAGAGAGATATGAAATAAAAACAATCAAAGCTTTCGAAATCTTCTATCCTTTTGAACTTGAAGAAGCCACTAACAATTTCGACAATTGCCTTGGAAAGGGAGGTTTCGGTGCTGTGTATTATGGGAAACTGGAAGATGGGCGTGAGGTAGCAGTAAAACGTTTCCTTGAAAAGAAAGACAAGACCATCAAGCAATTCAAGAAAGAGATTGATGTTTTGAGTCTCATGCGCCACCCAAATCTGGTTTCACTTTATGGATACAGTTCTCGCAACAGCAACATACACATGCTAGTAGTTAGTGACAAAAGTGATGTATATAGCTTTGGAGTGGTCTTGTTTGAGCTCATATCATCCAAGCCCCCAAGATACTCAGAAGGGCCAGAAGATAGTACCCTTGCTAAGTTTGGAGTTAGTAAGATGTTGAACAAGGCATTGGAGGAGCTAGTGGATCCAAGTCTTGGATTTGATTCAGACAAAAATGTGATGGAAATGATAACAGCAGTGGCAGAGTTAGCATTTCAGTGTGTGCAGTGTCCTAAGGAACTTAGGCCTTCTATGAAACAAGTGCTAGAGACACTTGAAGGCATTAAGAATGGCACATGGGGATTCAATCAGATAACATAG 1566 0.4087 MNLFKCCFCSTSSNRFPREKHLNWKIFPYKELAKATENFDQCHCLGKRGFGAVYYGKLKDGREIAVQCFHDDKHHIFQHFIEEPVILNYLPHKNLVSVYGFTSLDNESLLVHEYLSNGTLASYFQGELEESSNLPWRTRLDIAIGAANALYYLHCYGIIHRDLKSSNILLDKNFCAKVANFHLSRKLPRGVATHVTSDIIGTCGYIDPEYVSHGRLSVKNDVYSFGVVLCELISSKLEKDLVCREEDSIANFIGRKIENQALEELLDPRLGFKFDHKIKQMMTAVAELAFQCLQCPQVLRPHMEQVLDTLQGIREERYEIKTIKAFEIFYPFELEEATNNFDNCLGKGGFGAVYYGKLEDGREVAVKRFLEKKDKTIKQFKKEIDVLSLMRHPNLVSLYGYSSRNSNIHMLVVSDKSDVYSFGVVLFELISSKPPRYSEGPEDSTLAKFGVSKMLNKALEELVDPSLGFDSDKNVMEMITAVAELAFQCVQCPKELRPSMKQVLETLEGIKNGTWGFNQIT* 522
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g3457 521 ProSitePatterns Serine/Threonine protein kinases active-site signature. 158 170 IPR008271 GO:0004672|GO:0006468
Aev05g3457 521 ProSitePatterns Protein kinases ATP-binding region signature. 345 367 IPR017441 GO:0005524
Aev05g3457 521 SUPERFAMILY Protein kinase-like (PK-like) 16 323 IPR011009 -
Aev05g3457 521 Gene3D Phosphorylase Kinase; domain 1 10 114 - -
Aev05g3457 521 Gene3D Phosphorylase Kinase; domain 1 326 410 - -
Aev05g3457 521 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 66 412 IPR044652 -
Aev05g3457 521 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 23 73 IPR044652 -
Aev05g3457 521 Gene3D Transferase(Phosphotransferase) domain 1 115 325 - -
Aev05g3457 521 SMART serkin_6 39 308 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aev05g3457 521 ProSiteProfiles Protein kinase domain profile. 39 318 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aev05g3457 521 ProSiteProfiles Protein kinase domain profile. 339 521 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aev05g3457 521 Gene3D Transferase(Phosphotransferase) domain 1 411 516 - -
Aev05g3457 521 Pfam Protein kinase domain 343 411 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aev05g3457 521 PANTHER TYROSINE KINASE FAMILY PROTEIN 413 521 - -
Aev05g3457 521 SUPERFAMILY Protein kinase-like (PK-like) 328 509 IPR011009 -
Aev05g3457 521 PANTHER TYROSINE KINASE FAMILY PROTEIN 23 73 - -
Aev05g3457 521 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 413 521 IPR044652 -
Aev05g3457 521 PANTHER TYROSINE KINASE FAMILY PROTEIN 66 412 - -
Aev05g3457 521 Pfam Protein tyrosine and serine/threonine kinase 43 308 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g3457 Aev-Chr5 33954090 33957104 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev05g3457 413 512 Receptor kinase-like Gene Family AT1G25390 49.505 3.14e-22 98.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Aev05g3457 PK_Tyr_Ser-Thr 4.6e-36 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g3457 - - gmx:100801413 565.074