Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g3456 ATGGTATTGAAGATCATTTTGTTCTTGACATTCCATCCAGCAACCTCAACGTTGAACACTACTAGCACTTCTGATACATTTCAGGATGTTGTTGAGTCAGAGTGGACAATCTTCCCCTATTGGAAACTTGCAGAAGCCACAAATAATTTTGATGAATGTAATTGTCTTGGAAAGATAGGCTTGAAGAATGTATATTATGGCAAACTTATAAATGGGCGTGAGATTGCAATACAAAGATGTTCCAATGACAAGCTTCAAATATTTCAACAGTTCCTCAATGAAATTGTGATCTTAAACATCTATCCTCATAAAAATCTTGTGTCATTTTACGGTTACGCCTTTCATGATGAGGAATTCCTGATAGCACATGAACACGTCTCCAATGGCACTCTTGCTGCTCATCTTCAAGGTGAAATAAGATACTGCCCCATGTCATTACCCCTGCTTACCCGAATCGATATTGCCATTGATACTGCAAAGGCTTTGAGCTATCTTCACAATCATGGCATCGTCCATGGTAACATAGAATCCAATAATGTTCTCCTAGATGAGAAGTTTTGTGCCAAAGTTTTCGGCATTCATTCATTGAAGAAACTTACTCCACCAGGACTTTCAATTGATGCTGCTTTCCATGCTACAAGAGATGTGGTAGGAACATGTGCTTATATAGACCCGGAATATGAGTCGCATGGAATGCTTAGTGCCGAAATTGATGTTTATAGCTTTGGAGTGGTGTTGTGTGATCTCATATCATCCAAGCTTGCTCAGAATTGGGAAGGTTCCGACAAAGACAGTATTGCTGCTTTTTTAAGCAGAAAAATAAAAGATCAAGCTTGGGACACACTGCTAGATCCAAAACTTGGCTTCCAATCAGATAATGAGATCAAGCAGTTGATAATTGCAATGGCAGAGCTTGCCCTAAAGTGCTTGCAGTGTCCACAAGAAACAAGGCCAAACATGGAACAGGTGCTAGAGACTCTCAATGTCATTAGACAAGAGAGATATGATAGTTTACAAGCTTTCAAAATCTTTGACCATGCTGAACTCAAAGAAGCCACTAACCATTTTCGTACTAAGAGTATCCTTGGAGAGGGAGGGTTCGGCCGTGTCTTCTATGGAAAACTTCAAGATGGGCGCGAAATTGCAGTAAAACGTTTCCATAATGAGGAAGACAAGACCATTAAGCATTTCAAGAAAGAAATTGAGATCTTAAGACACTTGAACCATAAAAATCTGGTTTCACTATATGGCTGCAGTTCTGGTGACAGCAGGGAATACCTGCTGGTATATGAGTACATCTCCAATGGCACTCTTTCAAAACATCTTCGCGAAAAACTACCTTGGCTTACAAGACTGAACATTGCCATAGAAACAGCAACTGCATTGGCATATCTTCATGATTCTGGCATAATCCACCGCGATGTAAAGGGGAGCAACATTCTCTTGGATGAAGGCTTCACTGTCAAAGTCTCTGATTTCGGACTCTCGCGGTCTCTTCCGGATTGTGCTTCTCATGCTTCAACAATTCCAGTAGGGACTCGTGGCTATATGGATCCAGAGTATCTCCAAATAGGTAGGGTAAGTTATAGAAGTGATGTGTATAGTTTTGGGGTGGTCTTGTTTGAGCTCATATCATCGAAACCCGTAGGTTGGATGGAAGAAAACAATCAGCCGGTTGCCCTTGCTAATTTTGGAGTCAGTAAGATGTTAGGCAATGCATTGGAGGAGCTAGTGGATCCAAGTCTTGGGTTTGATTCAGACAAAAATGTGAAGGAAATGGTAACAGCAGTGGCAGAGTTAGCATTTCAGTGTGTGCAGTGTCCTAAGGAACTTAGGCCTTCCATGAAACAAGTGCTAGAGACCCTGGAAGGCATAAAGAAAGGAACATGGAGATTCAACCAGATAACATAG 1911 0.4113 MVLKIILFLTFHPATSTLNTTSTSDTFQDVVESEWTIFPYWKLAEATNNFDECNCLGKIGLKNVYYGKLINGREIAIQRCSNDKLQIFQQFLNEIVILNIYPHKNLVSFYGYAFHDEEFLIAHEHVSNGTLAAHLQGEIRYCPMSLPLLTRIDIAIDTAKALSYLHNHGIVHGNIESNNVLLDEKFCAKVFGIHSLKKLTPPGLSIDAAFHATRDVVGTCAYIDPEYESHGMLSAEIDVYSFGVVLCDLISSKLAQNWEGSDKDSIAAFLSRKIKDQAWDTLLDPKLGFQSDNEIKQLIIAMAELALKCLQCPQETRPNMEQVLETLNVIRQERYDSLQAFKIFDHAELKEATNHFRTKSILGEGGFGRVFYGKLQDGREIAVKRFHNEEDKTIKHFKKEIEILRHLNHKNLVSLYGCSSGDSREYLLVYEYISNGTLSKHLREKLPWLTRLNIAIETATALAYLHDSGIIHRDVKGSNILLDEGFTVKVSDFGLSRSLPDCASHASTIPVGTRGYMDPEYLQIGRVSYRSDVYSFGVVLFELISSKPVGWMEENNQPVALANFGVSKMLGNALEELVDPSLGFDSDKNVKEMVTAVAELAFQCVQCPKELRPSMKQVLETLEGIKKGTWRFNQIT* 637
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g3456 636 PRINTS Tyrosine kinase catalytic domain signature 531 553 IPR001245 GO:0004672|GO:0006468
Aev05g3456 636 PRINTS Tyrosine kinase catalytic domain signature 430 443 IPR001245 GO:0004672|GO:0006468
Aev05g3456 636 PRINTS Tyrosine kinase catalytic domain signature 464 482 IPR001245 GO:0004672|GO:0006468
Aev05g3456 636 ProSitePatterns Protein kinases ATP-binding region signature. 362 384 IPR017441 GO:0005524
Aev05g3456 636 Gene3D Transferase(Phosphotransferase) domain 1 433 633 - -
Aev05g3456 636 SUPERFAMILY Protein kinase-like (PK-like) 29 333 IPR011009 -
Aev05g3456 636 SUPERFAMILY Protein kinase-like (PK-like) 338 627 IPR011009 -
Aev05g3456 636 ProSitePatterns Serine/Threonine protein kinases active-site signature. 470 482 IPR008271 GO:0004672|GO:0006468
Aev05g3456 636 SMART serkin_6 356 620 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aev05g3456 636 SMART serkin_6 50 330 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aev05g3456 636 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 33 636 IPR044652 -
Aev05g3456 636 ProSiteProfiles Protein kinase domain profile. 50 330 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aev05g3456 636 Gene3D Transferase(Phosphotransferase) domain 1 126 331 - -
Aev05g3456 636 Gene3D Phosphorylase Kinase; domain 1 24 125 - -
Aev05g3456 636 PANTHER TYROSINE KINASE FAMILY PROTEIN 33 636 - -
Aev05g3456 636 Pfam Protein kinase domain 71 325 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aev05g3456 636 Pfam Protein kinase domain 357 620 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aev05g3456 636 ProSiteProfiles Protein kinase domain profile. 356 625 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aev05g3456 636 Gene3D Phosphorylase Kinase; domain 1 332 432 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g3456 Aev-Chr5 33947548 33952887 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev05g3456 343 626 Receptor kinase-like Gene Family AT1G25390 53.265 2.33e-96 307
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Aev05g3456 Pkinase 1.8e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g3456 - - gmx:102666805 738.028