Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g3453 ATGCTCCTTATTACACCCACGGTGACCATCCCTTTGTTGTTGCTGTTGCTAACCACTAATTTGCCTACATCCCTCTCTCAATCACCACTTCCCAACTCCCTTTGTAGCCAGAATCCGTACAAGTGCGGAGGACTCCCCGACATATATTATCCTTTCTGGGGTCAAAACCGGCCCCGTTACTGCGGCGGCGGGGACCAATTCCACCTCACATGCGACTCTGATCACACGTCAATTCAAATGGCATCACAAAATTTCGAGGTGGTGGACATTAAAACCCAATCTCACACCATGACAATGTTGCCACTAGAATACAATGTTTGCTCTCCGCAGTTCAATTTCTCTTTGGGCCCCGACCACATGATCTGGTATGCCAAAATTGTGTTCAAAATCACCGTGTTCTACGATTGTCCCTCGGAGGTTTCCGTTGGCACTGTGAACAACTTCACGTGCCAATCCAATAACAAGGGTAGTGTGGGTGTTTATCATATGGGCGTGGAAGATGAGGTGTTGGAAAAGTATCCGGAGCTTAAGAGATGTAGGCGGCGTATGCAGGTGCCTGGATATGAGAATGCTCCGTCTCCTGATGGTGGACTCCAGGCTCTGTATGGAGTTTTGCGTTCTGGGTTTCAGGTAAACTATGCTGCATCCCAGGAATGCTTAAGATGCATGGGAAGTGAAGGAGTTTGCGGGACCCATGATAATACTAGTCAGCTCATTGCCTGCTATTGCGCATATGGATCTAACGCCTTCCATTGTTCTAAAAGTAATCGAGTGGAATGGAAAAGGAAAGTCATCATAGGTGTTATAGGTGGCGTGTTGGTTCCAGGATTAATATTGATTTTCATCGGTATTTGTTGGCTTAGATGCAATTCATCAAAATCAAGATGGTGGCAAGACATATTTTGGTGGAGCTGGACTAATAGTAACAAGGATATTGAAGCATTCCTAAAGAACAATGGAGCTCTAACTCTAAAGAGATATAAATTTTCAGATGTTAAGAAAATGACCCACTCATTCAAATTCAAATTGGGACAAGGTGGCTTTGGTGTTGTGTACAAAGGAAAGCTTCTCAATGGATTGCCTGTGGCTGTAAAGATATTGAATCCATCCAAAGGAAATAATGACGACTTTATCAATGAGGTGACTAGTATTAGTAGAACTTCTCATGTTAATGTTGTCACTCTTCTTGGATTTTGCTTGGAAGGTCGTAGAAAAGCTCTCATCTATGAGTATATGTCCAATGGCTCTCTGGAAAAATTTATTTCCAACAAGAAGGGATCTCAAATAATCACTCCATCTTTGAGTTGGGATAAGTTTTATCAAATTGCAGTAGGGATAGCTAGAGGGTTGGAGTACTTGCATAGAGGATGCAGTACTCGGATTTTACATTTTGACATAAAACCATATAATATTCTTTTGGATGAGAATTTTTGTCCCAAGATATCGGATTTTGGGCTGTCAAAGCTATGCATCAAGAAAGAAAGTATTATTTCCATGTCAGATGCAAGAGGGACAATAGGGTATATAGCTCCAGAAGTGTGGAATAGACATCTTGGTGGGGCTTCTCATAAATCTGATGTTTATAGCTATGGAATGATGTTGCTTGAAATAGTTGGAGGGACCACCAATAACTTCAATAATGGAGAAGCAAGTCACTCCAGTGAGATATATTTCCCAGATTGGATATACAGAAGGCTTGAGCAAGGCACTGATCTAAGACATGATGGGGAGGAGGTGGCAATTGAGGAAAATGATGAAGTCGTTAGAAAAATGACTATTGTAGGTTTATGGTGCATCCAAACATTTCCCAATGATAGGCCTAAAATGAGTAGAGTTTTAGAGATGTTGGAATGCACCATCAATTCTTTAGAAATGCCACCAAAACCTGTTTTGTCTTCACCCATAAGATCAATTGCAGAATCTACCTTGTAA 1932 0.4167 MLLITPTVTIPLLLLLLTTNLPTSLSQSPLPNSLCSQNPYKCGGLPDIYYPFWGQNRPRYCGGGDQFHLTCDSDHTSIQMASQNFEVVDIKTQSHTMTMLPLEYNVCSPQFNFSLGPDHMIWYAKIVFKITVFYDCPSEVSVGTVNNFTCQSNNKGSVGVYHMGVEDEVLEKYPELKRCRRRMQVPGYENAPSPDGGLQALYGVLRSGFQVNYAASQECLRCMGSEGVCGTHDNTSQLIACYCAYGSNAFHCSKSNRVEWKRKVIIGVIGGVLVPGLILIFIGICWLRCNSSKSRWWQDIFWWSWTNSNKDIEAFLKNNGALTLKRYKFSDVKKMTHSFKFKLGQGGFGVVYKGKLLNGLPVAVKILNPSKGNNDDFINEVTSISRTSHVNVVTLLGFCLEGRRKALIYEYMSNGSLEKFISNKKGSQIITPSLSWDKFYQIAVGIARGLEYLHRGCSTRILHFDIKPYNILLDENFCPKISDFGLSKLCIKKESIISMSDARGTIGYIAPEVWNRHLGGASHKSDVYSYGMMLLEIVGGTTNNFNNGEASHSSEIYFPDWIYRRLEQGTDLRHDGEEVAIEENDEVVRKMTIVGLWCIQTFPNDRPKMSRVLEMLECTINSLEMPPKPVLSSPIRSIAESTL* 644
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g3453 643 PANTHER GLYCEROPHOSPHODIESTER PHOSPHODIESTERASE, PROTEIN KINASE RLK-PELLE-LRK10L-2 FAMILY-RELATED 12 640 - -
Aev05g3453 643 ProSitePatterns Serine/Threonine protein kinases active-site signature. 461 473 IPR008271 GO:0004672|GO:0006468
Aev05g3453 643 Pfam Wall-associated receptor kinase galacturonan-binding 35 99 IPR025287 GO:0030247
Aev05g3453 643 Gene3D Phosphorylase Kinase; domain 1 304 411 - -
Aev05g3453 643 SUPERFAMILY Protein kinase-like (PK-like) 324 617 IPR011009 -
Aev05g3453 643 Pfam Wall-associated receptor kinase C-terminal 150 244 IPR032872 -
Aev05g3453 643 PANTHER RUST RESISTANCE KINASE LR10-RELATED 12 640 IPR045874 GO:0004672
Aev05g3453 643 ProSiteProfiles Protein kinase domain profile. 337 631 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aev05g3453 643 SMART serkin_6 337 619 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aev05g3453 643 Pfam Protein tyrosine and serine/threonine kinase 340 616 IPR001245 GO:0004672|GO:0006468
Aev05g3453 643 Gene3D Transferase(Phosphotransferase) domain 1 412 626 - -
Aev05g3453 643 ProSitePatterns Protein kinases ATP-binding region signature. 343 365 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g3453 Aev-Chr5 33927258 33932320 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev05g3453 40 631 Receptor kinase-like Gene Family AT5G38260 39.638 1.49e-139 419
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Aev05g3453 PK_Tyr_Ser-Thr 4.4e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g3453 - - gmx:100792936 656.366