Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g3452 ATGGATGACCATATCCATATCCATATCCGCATGCTCCTAACAACTATATCCATCGTCCCTTTGCTGCTGTTATTAACCACTTTGCCACCATCAGTCTCTGAGCAACCACCCTCCAACAATTACTCCGCCTGTAGCCAGAATCCGTACAATTGCGCAACACTGTCCGACATATACTATCCTTTCTGGGGAGAGAACCGACCGTTTTACTGTGGCGGCGGCGAACAATTCCTCCTCACCTGCAACGAGACCGGTCAATACTCTTCCATTCAAATAGGCTCGCAGAAATTCATGGTGTTGAAAGTCGACGCCCAAGCTAACACCATGTGGATGGCAGCACTGCCACTAGAATACGAATTCTGTTCCATGGAATTCAACTTTTCTTTGAGCCCTTTCTTCTGGTATTCCAAATCTGTCAACAACATCACCATATTCTACAATTGTCCCTCTGGTGTTTCCAACGAGGAGGACAATTACAACTTTACATGCCCAGGTACTTCTGGTTCTAATGAGAATCAGAAGGTTGTCTACTATGAGGGTATGGTGGATGAGGTAATGGAACAACATCCGGAGCTCAAGAAATGCGGGCGGAGTTTCCAATTGCCCACTAATAAGACTTCTCTGAACCCTAATGCTGCAGTTAACGTTCAGACCGACGAAGCTATAGCTGGGGGTTTTCATGTGAAGTATGTTGTCTCTCAAGAATGCATTGGATGCGTGGGAAGTGAAGGAGTTTGCGGGACCAATAGCACGCGTCAATTTACCTGCTATTGTCCCGATGGTCTTAACGCCCTCACTTGTACTGTTCATCACCGTAATCGATGGCGATGGAAATTCAGCCATGTCGTTATAGGTTTTATACTTACAGTGATTCCAGGACTAATGTTGATATACATCACTATTTGTTGTTTTCGACGCGAATCATCAAGATGGGAAGAGATTTTTTCGTTTACGGCTAAAAGGAACCAAGATATTGAAGCAATGTTAAAAACCCATGGAGCTTTGAAAAGGTATAGTTTCTCAGATGTGAGGAAAATGACCAATTCCTTCCGAGTTAAATTAGGGAAAGGTGGTTTTGGTGATGTATACAAAGGAAGGCTGCTCACTAATGGATGCCATGTGGCTGTAAAGATATTGAATCAATCCAAAAAAAACGGTGAAGAATTTATGAATGAGATAGCTAGTATAAGTCGAACTTCTCATGTTAATGTTGTCGCCCTTCTTGGATTCTGTTTGGAAGGAAGCAAGAAAGCTCTCATCTATGAATTCATGTCCAATGGTTCCCTAGATAAGTTTATTTATAATAAGAGGGGGAGTGAAATCACTCCATCCTTGAGCTGGGATAATTTATATCAAATTGCTAAAGGGATAGCTAGAGGATTGGAGTATTTGCATAGAGGATGCAACACCCGAATTTTACATTTTGACATAAAACCACATAACATTCTATTGGACGAGAACTTGTGCCCCAAGATATCCGATTTTGGGCTGGCAAAACTCTGTCCAATGAGAAAGAGCATTGTTTCAATGTCCAATGCTAGAGGAACAATTGGGTATGTAGCTCCAGAAGTATGGAATAGACACTTCGGTGGAGTTTCCCATAAGTCTGATGTTTATAGCTATGGAATGATGCTTCTAGAAATGGTGGGAGGGAGGAAGAACATTAATGCTGAAGCAAGTCATACGAGCGAGATATATTTCCCAAATTGGATTTATGGAAGGCTTGAGCAAGGCACTCAATTGGGACTAGATGGGGATGCGGCGACCATAGAAGAAAATGAGGTTGTTAAAAGAATGATTCTGGTGGGTTTATGGTGTATTCAGACCATTCCAAATAATAGACCCACTATGAGTAGAGTTATAGAAATGTTGGAAGGCAACATTAATTTTTTGGAAATGCCACCAAAACCTAATCTTTCTTCTCCCATCAGATCAGTGGCAGAATCTTCTGCTACTGTTAATTAA 1962 0.4185 MDDHIHIHIRMLLTTISIVPLLLLLTTLPPSVSEQPPSNNYSACSQNPYNCATLSDIYYPFWGENRPFYCGGGEQFLLTCNETGQYSSIQIGSQKFMVLKVDAQANTMWMAALPLEYEFCSMEFNFSLSPFFWYSKSVNNITIFYNCPSGVSNEEDNYNFTCPGTSGSNENQKVVYYEGMVDEVMEQHPELKKCGRSFQLPTNKTSLNPNAAVNVQTDEAIAGGFHVKYVVSQECIGCVGSEGVCGTNSTRQFTCYCPDGLNALTCTVHHRNRWRWKFSHVVIGFILTVIPGLMLIYITICCFRRESSRWEEIFSFTAKRNQDIEAMLKTHGALKRYSFSDVRKMTNSFRVKLGKGGFGDVYKGRLLTNGCHVAVKILNQSKKNGEEFMNEIASISRTSHVNVVALLGFCLEGSKKALIYEFMSNGSLDKFIYNKRGSEITPSLSWDNLYQIAKGIARGLEYLHRGCNTRILHFDIKPHNILLDENLCPKISDFGLAKLCPMRKSIVSMSNARGTIGYVAPEVWNRHFGGVSHKSDVYSYGMMLLEMVGGRKNINAEASHTSEIYFPNWIYGRLEQGTQLGLDGDAATIEENEVVKRMILVGLWCIQTIPNNRPTMSRVIEMLEGNINFLEMPPKPNLSSPIRSVAESSATVN* 654
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g3452 653 ProSitePatterns Protein kinases ATP-binding region signature. 353 376 IPR017441 GO:0005524
Aev05g3452 653 SMART serkin_6 347 630 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aev05g3452 653 SUPERFAMILY Protein kinase-like (PK-like) 327 624 IPR011009 -
Aev05g3452 653 ProSiteProfiles Protein kinase domain profile. 347 630 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aev05g3452 653 PANTHER RUST RESISTANCE KINASE LR10-RELATED 17 651 IPR045874 GO:0004672
Aev05g3452 653 Pfam Wall-associated receptor kinase C-terminal 162 260 IPR032872 -
Aev05g3452 653 PANTHER GLYCEROPHOSPHODIESTER PHOSPHODIESTERASE, PROTEIN KINASE RLK-PELLE-LRK10L-2 FAMILY-RELATED 17 651 - -
Aev05g3452 653 Gene3D Phosphorylase Kinase; domain 1 312 422 - -
Aev05g3452 653 ProSitePatterns Serine/Threonine protein kinases active-site signature. 471 483 IPR008271 GO:0004672|GO:0006468
Aev05g3452 653 Pfam Protein kinase domain 351 620 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aev05g3452 653 Pfam Wall-associated receptor kinase galacturonan-binding 44 111 IPR025287 GO:0030247
Aev05g3452 653 CDD STKc_IRAK 353 625 - -
Aev05g3452 653 Gene3D Transferase(Phosphotransferase) domain 1 423 631 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g3452 Aev-Chr5 33920267 33925532 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev05g3452 17 638 Receptor kinase-like Gene Family AT5G38260 39.286 1.37e-140 422
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Aev05g3452 Pkinase 3.3e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g3452 - - gmx:100792936 686.026