Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g3447 ATGAGATATTCCGTGGTCCTCATCTCCTTGTTGTTAAGCGCTTTGCCACCGTCCCTGTGTCAACCACCACGCTCTAATTACACATCAGTCTGTAGCCAGCCATACAAGTGCGGAGAACATCCCGAGTTGTACTATCCTTTCTGGGGCAGGGGAGATAACGTCCGACCCGCTTTCTGCGGCGGCGGTGACCAATTCAAGCTCACCTGCGAGGAGATGGACCAGCCTTCCTATGGTGGAAATGGGGCGTCCACATACTACACTTCCTTCATTGAAATGGGTTCACAGAAATTCGAGGTGTCGGACATTGACCCCACCGCTTACACAATGAAAATGGTGCCAATGGGTGAAGGGCCTGATGTTGTTTGTTCTCCGGACTTCAACTTTTCTTTGAGCCCTGTCTTCAGGTATGACCAAATCGTGCATAACATCACCGTAATACTAATCTCCGATTGCCCCAGGGGAGTTTCCCCAAGTGGTGATGGGAAGAACTTCACATGCCATGATGGTGTAGCAGTGTTGTATTATTATGATGAGGGTGGGAAAGAGGAGGTGTTGAAACAGCATCCAGAGCTTGATGGTTGCGGGCGTATCATGGAAATGCCTGCTGAGGCTGTTGATGTTGCGCGTCATGGCGGAGACGCAGTTGATGCTCTGCAAGGAGCTTTGGGTGAAGGTTTTAATGTGCGCTACAGCGTTTCAGAGGAATGCATGAGATGCGCGGGAAGCAAAGAAGCCTGGTGCGGGAGCAATGATGAATCAGAATTCACCTGCTATTGCCCACATAATAGATTTAGCGCCCGCAATTGTTTTGGTCATGCTCCTCCTCCTGCCACTGCTCCTCCTCCTGCTCATGCTCCTGCTGCTGCTCCTCCTCCTGCTCATGCTCCTGCTGCTGCTCACAAAAGGGTGGCGATTGCTGTACTGTTGATTGCTGTGCTGTTGACTATTTGTTGTTTCAAATTCAAATCATCAAAATGGCCAACACACTCTTGTTGGTTCTCAACAAAGAGTAACCAAGACATTGAAGCCTTCTTAAAAAATCATGGAGCTTTAACTCTTAAAAGATACAAATTTTCTGATGTGAAGAAAATGACCAACTCCAAAATTAAACTTGGACAAGGTGGTTTTGGTTCTGTATATAAAGGGAAGCTACTCAATGGTTCCAATGTGGCTGTAAAGGTATTGACCCGGTCCAAAGGAAATGGTGAAGAATTCATCAATGAAGTGGCTAGCATCAGTAGAACTTCTCATGTTAATGTTGTTACTCTTCTTGGATTCTGCATAGAAGGTCATAACAAAGTTCTTATCTATGAGTTTATGTCTAATGGTTCACTTGACAAGTTTATTTACAACAAAGGACAACAAAAAATCTCATCCTTAAGTTGGGATAGTTTATATCAAATTGTAATAGAGATAGCTAGAGGTTTGGAGTATTTGCATAGAGGATGCAGTACTCGAATTTTGCATCTTGACATAAAGCCGCATAATATTCTTTTGGATGAGAATTTTTGTCCTAAGATATCAGATTTCGGGCTAGCGAAGCTCTGTCCTAGAAAAGAAAGCATAATTTCAATGTCAGATGCTAGAGGAACAATAGGTTATGTAGCTCCAGAAGTTTGGAACAGACATTTCAGTGGAGTTTCGCATAAATCTGATGTTTATAGCTATGGAATGATGTTGCTTGAAATAGTAGGAGGGAGGAAGAACATTAATGCAGAAGCTAGCCACACAAGTGAGATATATTTTCCAGATTGGATATACAGAAAACTTGAGCAAGGCACTGATTTGGGAGTTGATGGGGTGGTGGCAGTAGAAGAAAATGATGAGGTCATCAAAAGAATCACTATGGTGGGTTTATGGTGCATTCAGACATTTCCAAATGATAGACCAACAATGAGTAGAGTTGTAGAAATGTTGGAAGGAAACATGAGTTCTTTGGAAATGCCACCAAAGCCTGTTCTATCTTCACCAGTAAGATCAGTGGTAGAATCTTCTTCTACTACTGCTAATTAA 2013 0.4337 MRYSVVLISLLLSALPPSLCQPPRSNYTSVCSQPYKCGEHPELYYPFWGRGDNVRPAFCGGGDQFKLTCEEMDQPSYGGNGASTYYTSFIEMGSQKFEVSDIDPTAYTMKMVPMGEGPDVVCSPDFNFSLSPVFRYDQIVHNITVILISDCPRGVSPSGDGKNFTCHDGVAVLYYYDEGGKEEVLKQHPELDGCGRIMEMPAEAVDVARHGGDAVDALQGALGEGFNVRYSVSEECMRCAGSKEAWCGSNDESEFTCYCPHNRFSARNCFGHAPPPATAPPPAHAPAAAPPPAHAPAAAHKRVAIAVLLIAVLLTICCFKFKSSKWPTHSCWFSTKSNQDIEAFLKNHGALTLKRYKFSDVKKMTNSKIKLGQGGFGSVYKGKLLNGSNVAVKVLTRSKGNGEEFINEVASISRTSHVNVVTLLGFCIEGHNKVLIYEFMSNGSLDKFIYNKGQQKISSLSWDSLYQIVIEIARGLEYLHRGCSTRILHLDIKPHNILLDENFCPKISDFGLAKLCPRKESIISMSDARGTIGYVAPEVWNRHFSGVSHKSDVYSYGMMLLEIVGGRKNINAEASHTSEIYFPDWIYRKLEQGTDLGVDGVVAVEENDEVIKRITMVGLWCIQTFPNDRPTMSRVVEMLEGNMSSLEMPPKPVLSSPVRSVVESSSTTAN* 671
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g3447 670 Gene3D Phosphorylase Kinase; domain 1 330 439 - -
Aev05g3447 670 ProSiteProfiles Protein kinase domain profile. 365 646 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aev05g3447 670 Gene3D Transferase(Phosphotransferase) domain 1 440 649 - -
Aev05g3447 670 PANTHER GLYCEROPHOSPHODIESTER PHOSPHODIESTERASE, PROTEIN KINASE RLK-PELLE-LRK10L-2 FAMILY-RELATED 7 269 - -
Aev05g3447 670 ProSitePatterns Serine/Threonine protein kinases active-site signature. 487 499 IPR008271 GO:0004672|GO:0006468
Aev05g3447 670 SUPERFAMILY Protein kinase-like (PK-like) 370 640 IPR011009 -
Aev05g3447 670 ProSitePatterns Protein kinases ATP-binding region signature. 371 393 IPR017441 GO:0005524
Aev05g3447 670 PANTHER RUST RESISTANCE KINASE LR10-RELATED 305 667 IPR045874 GO:0004672
Aev05g3447 670 PANTHER RUST RESISTANCE KINASE LR10-RELATED 7 269 IPR045874 GO:0004672
Aev05g3447 670 Pfam Wall-associated receptor kinase galacturonan-binding 31 111 IPR025287 GO:0030247
Aev05g3447 670 SMART serkin_6 365 646 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aev05g3447 670 MobiDBLite consensus disorder prediction 647 670 - -
Aev05g3447 670 Pfam Wall-associated receptor kinase C-terminal 186 261 IPR032872 -
Aev05g3447 670 Pfam Protein tyrosine and serine/threonine kinase 369 639 IPR001245 GO:0004672|GO:0006468
Aev05g3447 670 PANTHER GLYCEROPHOSPHODIESTER PHOSPHODIESTERASE, PROTEIN KINASE RLK-PELLE-LRK10L-2 FAMILY-RELATED 305 667 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g3447 Aev-Chr5 33893310 33899286 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev05g3447 30 667 Receptor kinase-like Gene Family AT1G66910 39.640 1.57e-131 400
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Aev05g3447 PK_Tyr_Ser-Thr 1.2e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g3447 - - ahf:112751085 627.091