Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g3440 ATGGCGACGCCGCTAACGGGGATGCAGCACCTTGAAGGCGTGGCAGTGCTGGCGAACAATCGAGTGAGCAAGGTGGATCCTTCGTCTTCCTCCTCCAATGGCGGCACTTTCAGCGGCTCGCTATTGGAGTCGCCAATTTTGATATTTTCGTTCTTCCAAAAAGCGATTCGGAACGAGCTTGACGCCTTGCACCGGTCCGCGATGGCTTTTGCCACCGGAGACGATGACCGCTCCGATATCAGGCCGCTGTCGGAACGGTACCATTTCGTCAGATCGATGTACACGCACCACTCCAATGCCGAAGATGAGGTGATTTTTCCAGCTCTAGATATACGTGTGAAGAATGTCGCACAGACTTATTCCCTTGAACACAAGAGTGAAAGTAATCTTTTTGATCATCTATTTGAGCTGTTGAATTCTTCGATGCATAATGATGAAAGTTTTGCAAGGGAGTTGGCATCGTGCACTGGAGCTCTCCAGACATCAGTTAGTCAGCACATGGCTAAGGAAGAGGAGCAGGTTTTTCCACTGCTTATTGAGAAGTTCTCTCTTGAGGAACAGGCATCTTTAGTTTGGCAATTTCTTTGCAGTATTCCTGTGAATATGATGGCAGAATTTCTTCCATGGCTGTCATCATCTATATCACCAGATGAATCTCAGGATTTGAGGAAGTGCTTAAGAAAAGTAGTACCAGAGGAAAAACTACTTCAAAAGGTTATTTTCGCCTGGATGGAAGGGAGAAGTAGTGCTAACACAGTTGAAAATTGTGTAGATCATTCTCAGGTTCAATGTAGTCCAGGTCCGTCAGCCCATCAGACTGGGAAAGTAAAATGTGCATGTGAGCCCACAACAACCGGGAAAAGGAAATATTCTGGATCTTTTATAGATGCTTCTGACACAATGGGAACACATCCTATAGATGAAATATTGTTGTGGCATAATGCAATAAAGAAAGAACTAAATGAGATAGCAGTGGAGACCAGAAAAATACAACTCTCTGGAGATTTTACTAATCTGTCAGCTTTTAATGAAAGGTTGCAATTCATCGCTGAAGTTTGCATATTTCACAGTATTGCTGAGGACAAGGTTATTTTTCCAGCAGTAGATGGAGAGCTTTCTTTCCTTCAGGAGCATGCTGAAGAAGAAATCCAGTTCAATGAATTCAGGTGTTTAATTGAAAGTATTCAAAGTGAAGGAGCAACATCTAGTTCAGAAGCTGAATTTTATTCCAAGCTGTGCTCACATGCTGATCTTATAATGGAAACTATTCAGAATCATTTCCAGAACGAAGAAGTCCAGGTTCTTCCACTTGCACGGAAGCACTTTAATTTCAAAAAGCAACGTGAACTTCTGTATCAAAGCTTGTGCATGATGCCTCTGAAATTAATTGAGCGTGTGCTGCCATGGTTGGTTGGATCATTAACCGAAGATGAAGCAAAGATGTTTCTGAAAAATATGCAATTGGCAGCTCCAGCGGCAGATTCTGCCCTAGTCACACTATTCACTGGTTGGGCTTGCAAGGCTCGTAACTATGATCTGTGTTGGTCTTCAAGTGAATCAGGTTGCTGTCATGCTCAGAGACTGACTGATATAGAAGAAAATATGGTTCAATCTTCCTGTGCTTGTGCTTCTGTTTCTGCTGCTAGAGATCGCTCTATATTAGATGATTCAGATGGGGCCGAAAGATCAGTCAAGCGGAACATATTGGAGTTTCACAAGAATGGAGATGTTCCTGAAACTTCAGAAAATGGAAATATCCAGAAGAAGTGTTGTAATGGCCAGTCTTGTTGTGTCCCAGCTTTAGGAGTCAACAGTAACAATTTGGGGCTGAGTTCACTTGCTACAGCCAAGTCCTTGCGCTCCATGTCTTTCACCTCCTCTGCCCCATCGCTTAATTCTAGTCTTTTCATATGGGAAACGGACAGCAGCTCATGTGATGCAGGCTCTACAGAGAGACCCATTGATACCATATTTAAATTCCATAAAGCCATACGCAAGGACTTGGAGTATTTAGACGTTGAATCTGGAAAGCTTACTGAACGTGATGAAGCAACTCTTCGGCAGTTTAGTGGAAGATTTCGTCTTTTGTGGGGTTTATATAGAGCTCATAGTAATGCTGAAGATGATATAGTATTTCCTGCCTTGGAATCCAAAGAGACACTTCACAATGTGAGCCATTCTTACACGCTGGACCATAAGCAGGAAGAAAAGTTATTTGAAGATATTTCTTGCACTCTTTCTGAGCTTTCAGCCCTTCATGAAGCCTTGCAGATGTCCTGTATGTCAGAGGATTTAAATGAAAGTAATTTTGGAACTTCTGATGCAGACGATAGTGATAATGTCAGAAAGTACAACGAGCTTGCAACTAAGCTTCAAGGGATGTGCAAATCTGTAAGAGTGACCCTGGATCAGCATATTTTCAGGGAAGAACTCGAGCTCTGGCCATTGTTTGGGAAACATTTCACGGTGGAAGAACAGGACAAGTTAGTGGGCCGGATCATTGGAACTACCGGTGCTGAAGTTCTCCAATCAATGCTACCTTGGGTAACTTCTGCACTTACTGAGGATGAACAGAACAAAATGATGGACACATGGAAACAAGCAACTAAGAACACTATGTTCAATGAGTGGCTAAATGAATGCTTGAAAGAGAGTCCAGTGTCTAATTCACAGGCAGAAACATCAGAGCGTAACACATCTCAAAGAGGTTCTGACCATCAAGAAAGCTTGGACCATAATGATCAGATGTTCAAGCCAGGTTGGAAAGACATATTCCGGATGAATCAGAATGAACTTGAGTCAGAGATCCGGAAGGTTTATCGTGACTCAACTCTTGATCCAAGGAGAAAGGCATATCTTGTGCAGAATCTAATGACAAGTCGCTGGATTGCTGCCCAACAGAAGCTACCTAAAGCTTTATCTGGGGACTCCTCTAAAGAAATAGAAGGTCGCTCACCATCATTTCGGGACCCAGAGAAGCAAGTATTTGGCTGTGAGCATTATAAGAGAAATTGCAAGCTTCGTGCTGCTTGTTGTGGCAAGTTATTTACATGCAGATTTTGCCATGACAATGTGAGCGATCACTCAATGGATAGAAAAGCAACAATGGAAATGATGTGTATGGTCTGCCTGAATATACAACCAGTTGGGCCTATATGCATGTCTCCTTCTTGTAATGGACTTTCTATGGCAAAATACTATTGCAGCATATGCAAATTTTTTGATGACGAAAGGAATGTATATCACTGCCCATTTTGCAATATATGCCGTGTTGGGCAAGGGCTTGGTATAGACTATTTTCACTGTATGAAATGCAATTGTTGCCTTGGGATAAAATCAGCATCTCACAAATGCCTGGAGAAAGGTCTAGAAATGAATTGCCCAATCTGCTGTGACGACTTGTTCACATCGAGTGCAACAGTCAGAGCTCTACCCTGTGGGCATTACATGCATTCGGCTTGCTTTCAGGCATACACATGTAGTCACTACACATGTCCAATCTGCAGCAAGTCATTGGGAGATATGGCGGTTTACTTTGGTATGCTTGATGCTCTATTGGCCGCTGAGGCGCTTCCTGAAGAATACAGGGATCGCCATCAGGACATACTCTGCAACGACTGTGATCGAAAGGGCACCACACGCTTCCACTGGCTATATCACAAATGCGGATTCTGCGGCTCGTATAACACCCGGGTGATCAAGACCGAGGCAACAAATTCTAGCTGCTCTTAG 3732 0.4322 MATPLTGMQHLEGVAVLANNRVSKVDPSSSSSNGGTFSGSLLESPILIFSFFQKAIRNELDALHRSAMAFATGDDDRSDIRPLSERYHFVRSMYTHHSNAEDEVIFPALDIRVKNVAQTYSLEHKSESNLFDHLFELLNSSMHNDESFARELASCTGALQTSVSQHMAKEEEQVFPLLIEKFSLEEQASLVWQFLCSIPVNMMAEFLPWLSSSISPDESQDLRKCLRKVVPEEKLLQKVIFAWMEGRSSANTVENCVDHSQVQCSPGPSAHQTGKVKCACEPTTTGKRKYSGSFIDASDTMGTHPIDEILLWHNAIKKELNEIAVETRKIQLSGDFTNLSAFNERLQFIAEVCIFHSIAEDKVIFPAVDGELSFLQEHAEEEIQFNEFRCLIESIQSEGATSSSEAEFYSKLCSHADLIMETIQNHFQNEEVQVLPLARKHFNFKKQRELLYQSLCMMPLKLIERVLPWLVGSLTEDEAKMFLKNMQLAAPAADSALVTLFTGWACKARNYDLCWSSSESGCCHAQRLTDIEENMVQSSCACASVSAARDRSILDDSDGAERSVKRNILEFHKNGDVPETSENGNIQKKCCNGQSCCVPALGVNSNNLGLSSLATAKSLRSMSFTSSAPSLNSSLFIWETDSSSCDAGSTERPIDTIFKFHKAIRKDLEYLDVESGKLTERDEATLRQFSGRFRLLWGLYRAHSNAEDDIVFPALESKETLHNVSHSYTLDHKQEEKLFEDISCTLSELSALHEALQMSCMSEDLNESNFGTSDADDSDNVRKYNELATKLQGMCKSVRVTLDQHIFREELELWPLFGKHFTVEEQDKLVGRIIGTTGAEVLQSMLPWVTSALTEDEQNKMMDTWKQATKNTMFNEWLNECLKESPVSNSQAETSERNTSQRGSDHQESLDHNDQMFKPGWKDIFRMNQNELESEIRKVYRDSTLDPRRKAYLVQNLMTSRWIAAQQKLPKALSGDSSKEIEGRSPSFRDPEKQVFGCEHYKRNCKLRAACCGKLFTCRFCHDNVSDHSMDRKATMEMMCMVCLNIQPVGPICMSPSCNGLSMAKYYCSICKFFDDERNVYHCPFCNICRVGQGLGIDYFHCMKCNCCLGIKSASHKCLEKGLEMNCPICCDDLFTSSATVRALPCGHYMHSACFQAYTCSHYTCPICSKSLGDMAVYFGMLDALLAAEALPEEYRDRHQDILCNDCDRKGTTRFHWLYHKCGFCGSYNTRVIKTEATNSSCS* 1244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g3440 1243 ProSiteProfiles Zinc finger CTCHY-type profile. 1063 1126 IPR017921 -
Aev05g3440 1243 Pfam Ring finger domain 1126 1168 IPR001841 -
Aev05g3440 1243 PANTHER RING FINGER AND CHY ZINC FINGER DOMAIN-CONTAINING PROTEIN 1 21 1242 - -
Aev05g3440 1243 ProSiteProfiles Zinc finger CHY-type profile. 991 1060 IPR008913 GO:0008270
Aev05g3440 1243 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1122 1171 IPR013083 -
Aev05g3440 1243 SUPERFAMILY CHY zinc finger-like 991 1055 IPR037274 GO:0008270
Aev05g3440 1243 SUPERFAMILY Zinc hairpin stack 1064 1120 IPR037275 -
Aev05g3440 1243 Pfam CHY zinc finger 998 1073 IPR008913 GO:0008270
Aev05g3440 1243 SMART ring_2 1127 1168 IPR001841 -
Aev05g3440 1243 Pfam Zinc-ribbon 1174 1231 IPR039512 -
Aev05g3440 1243 SUPERFAMILY RING/U-box 1124 1179 - -
Aev05g3440 1243 CDD Hr-like 655 815 - -
Aev05g3440 1243 CDD Hr-like 307 436 - -
Aev05g3440 1243 Gene3D - 1198 1239 - -
Aev05g3440 1243 MobiDBLite consensus disorder prediction 899 913 - -
Aev05g3440 1243 CDD RING-H2_Pirh2 1126 1169 - -
Aev05g3440 1243 Gene3D nmb1532 protein domain like 649 892 - -
Aev05g3440 1243 ProSiteProfiles Zinc finger RING-type profile. 1127 1169 IPR001841 -
Aev05g3440 1243 CDD Hr-like 48 176 - -
Aev05g3440 1243 PANTHER CHY ZINC FINGER PROTEIN 21 1242 - -
Aev05g3440 1243 MobiDBLite consensus disorder prediction 885 913 - -
Aev05g3440 1243 Pfam Hemerythrin HHE cation binding domain 304 438 IPR012312 -
Aev05g3440 1243 Pfam Hemerythrin HHE cation binding domain 653 816 IPR012312 -
Aev05g3440 1243 Pfam Hemerythrin HHE cation binding domain 54 178 IPR012312 -
Aev05g3440 1243 Gene3D nmb1532 protein domain like 307 454 - -
Aev05g3440 1243 Gene3D nmb1532 protein domain like 44 196 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g3440 Aev-Chr5 33830847 33838736 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev05g3440 1 1243 C2H2 Transcription Factor Family AT3G18290 67.883 0.0 1714
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g3440 K16276 - gmx:100791354 2168.66
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev05g3440 05 33830847 33838736 Aev05g3440 05 33830847 33838736 ECH
Aev03g3340 03 31193937 31201420 Aev05g3440 05 33830847 33838736 PCT