Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g3436 ATGCATTCTTCTTCTTCTCCTTCAAAGAGTATTAGTTGTTCTAGTGAAGAATATAGTGAACTTAGAAGAGGACCTTGGACTCATGAAGAGGATGATCTGCTCACAAAATCCATTGCTAATCATGGACAAGGTAGATGGAATTTGCTTGCTAACCGTTCAGGATTAAGAAGAACAGGGAAGAGTTGCAGATTAAGATGGTTAAATTATCTTAGACCAGATGTAAAAAGAGGAAATTTAACTCCAGAAGAACAGCTTTTGATTTTTGAACTTCACTCAAAGTGGGGTAACAGGATTCAGAAACAAGTGAAATATCTGAAATCTGACACTGACAAAGCAGGGTTTCATGATATTCTTCTTCAGGGTTTATGGAGGAAAAGGTTTCTTCAGAAAGCAAAAGAATCATCTCCTTCTGCCATTTCAATCCAAAACCAAGAAATTCCATTCCCTCATGATGTTGTGCCTCAATATTCAGTGATTGAGACAACACCAACATCACAAATATCAGATTCTGATGAGCAGAACAATGGTTCATTCAATTCTTCTTTAGAATCAGAAAATATCCCAAATATGCATCAGATTTTGGGATACAGTACTCCTAGTGCTGGTCAATTTCAGGCTTTTGATAACAATTATTTTGGCACCAATGCATATGATAGTTACCATGCACTTAACAATGCCTATGAGATTGATGCCTTCAACATGACTGCTACAGTGGTTGCTGAGAATATGGAATGTCCAATTGGTGATTGCCAAGTGTCAGAAAGCAATTGGCTACACAAGGATCTTGCATTTGTGAAGATGTACACTTCAAGGAAGAAAATCCACAAAGACAAGGATGCTGAGCCAACTGAATTTGAGGAGTCTGTTGGACAGGCATTGTTTGATCTTGAAAACACCAACCAGGAGCTGAAAAGTGATCTGAAAGATTTATACATAAATTCAGCTGTCCAAATTGATGTCTCTGGGAACCGTAAGGCCGTGGTTATCCATGTCCCCTACAGACTAAGGAAAGGCTTCAAGAAGATTCATGTCAAGCTTGTGAGAGAGCTTGAGAAGAAGTTTAGTGGCAAGGATGTAGTCTTGATTGCGACCAGGAGGATTGTGAGGCCACCAAAGAAAGGCTCTGCTGTACAACGTCCCCGAAGCCGAACACTTACTGCTGTGCATGAGGCAATGCTGGAAGATATTGTATTGCCAGCTGAGATTGTTGGGAAGCGTGTTAGGTACAGAATTGATGGATCAAAGATCATGAAGGTTTTCTTGGACCCCAAGGAGAAAAACAACACTGAGTTAAAGCTTGAGACTTTTGCTGCAGTATACAGGAAACTTTCAGGCAAAGATGTTGTGTTTGAGTACCCTCTTGCAGAGGCTTAG 1374 0.401 MHSSSSPSKSISCSSEEYSELRRGPWTHEEDDLLTKSIANHGQGRWNLLANRSGLRRTGKSCRLRWLNYLRPDVKRGNLTPEEQLLIFELHSKWGNRIQKQVKYLKSDTDKAGFHDILLQGLWRKRFLQKAKESSPSAISIQNQEIPFPHDVVPQYSVIETTPTSQISDSDEQNNGSFNSSLESENIPNMHQILGYSTPSAGQFQAFDNNYFGTNAYDSYHALNNAYEIDAFNMTATVVAENMECPIGDCQVSESNWLHKDLAFVKMYTSRKKIHKDKDAEPTEFEESVGQALFDLENTNQELKSDLKDLYINSAVQIDVSGNRKAVVIHVPYRLRKGFKKIHVKLVRELEKKFSGKDVVLIATRRIVRPPKKGSAVQRPRSRTLTAVHEAMLEDIVLPAEIVGKRVRYRIDGSKIMKVFLDPKEKNNTELKLETFAAVYRKLSGKDVVFEYPLAEA* 458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g3436 457 MobiDBLite consensus disorder prediction 163 183 - -
Aev05g3436 457 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 20 74 IPR017930 -
Aev05g3436 457 PANTHER 40S RIBOSOMAL PROTEIN S7 210 457 IPR000554 GO:0003735|GO:0005840|GO:0006412
Aev05g3436 457 ProSitePatterns Ribosomal protein S7e signature. 345 358 IPR000554 GO:0003735|GO:0005840|GO:0006412
Aev05g3436 457 Pfam Myb-like DNA-binding domain 23 70 IPR001005 -
Aev05g3436 457 Pfam Ribosomal protein S7e 273 452 IPR000554 GO:0003735|GO:0005840|GO:0006412
Aev05g3436 457 PANTHER 40S RIBOSOMAL PROTEIN S7 210 457 - -
Aev05g3436 457 Gene3D - 15 75 - -
Aev05g3436 457 SMART sant 22 72 IPR001005 -
Aev05g3436 457 SUPERFAMILY Homeodomain-like 21 110 IPR009057 -
Aev05g3436 457 Coils Coil 293 313 - -
Aev05g3436 457 ProSiteProfiles Myb-like domain profile. 18 70 IPR001005 -
Aev05g3436 457 CDD SANT 25 70 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g3436 Aev-Chr5 33789544 33794544 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev05g3436 267 457 Cytoplasmic Ribosomal Protein Gene Family AT3G02560 78.534 2.43e-109 319
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Aev05g3436 Ribosomal_S7e 2.2e-78 CL0652
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g3436 K02993 - gmx:100527642 358.992
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev05g3436 05 33789544 33794544 Aev05g3436 05 33789544 33794544 ECH