Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g3435 ATGGCTCAATTCACTGAAGATTTGCATAATTTCAGACCATTATCATCTTTTCCTTTCTTAGATAATAATATTGATCCAAGCATGGAACTCATAAATCAGTTCATAGGAATGAACAACACACATGTCAACATGCCTCCTTTGTCATCTGACACTTTCTTTGCCTCTGAGTTTCAAGCAAACTTGGAACAAAGTGCTTTTCAAAGTCTTGTCCATGATGTCTATGAAGTTCCAGTTTCTTCATCCACTATTGTTCCTAATTTTCATCAGGCAGAGAATAGTAGTGAAATCCATGAAGGTAAAAAGAGGAAAGCAATAACAATGGATGTTGTTGTTCCAGCAACTACTAGCTCAGCAAACTCAACCCCTGCATCTTCTGATAATGGAAGCAGGACAAAAAATGGCTTTGGAAGAGGCAAGAGAGTGAAAAGCAATGTAACAGAAGATGAGAGAAAACCAAAGGAAGTTGTTCATGTCAGAGCAAGGAGAGGTCAAGCCACTGATAGTCACAGCATAGCAGAAAGGGTCAGAAGAGGGAAAATCAATGAAAAATTGAAGTGTTTACAGAACATTGTCCCAGGATGTTACAAGACTATGGGTATGGCAGTAATGTTGGATGAAATCATTAACTATGTCCAGTCTTTGCAGAATCAAGTAGAGTTCCTTTCTTTGAAGCTTACTGCAGCAAGTACCTTTTATGACTTCAATTCAGAGACAGATGATTTAGAAACAATGCAGAGAGCAAGGGCATCCAATGCAAAAGAGTTAGCCAAGTATGGGAGAGAAGGGAGTGGAGGAGCTTCTTGCTATCAACCAAGTTGGCCACTTTGA 828 0.3925 MAQFTEDLHNFRPLSSFPFLDNNIDPSMELINQFIGMNNTHVNMPPLSSDTFFASEFQANLEQSAFQSLVHDVYEVPVSSSTIVPNFHQAENSSEIHEGKKRKAITMDVVVPATTSSANSTPASSDNGSRTKNGFGRGKRVKSNVTEDERKPKEVVHVRARRGQATDSHSIAERVRRGKINEKLKCLQNIVPGCYKTMGMAVMLDEIINYVQSLQNQVEFLSLKLTAASTFYDFNSETDDLETMQRARASNAKELAKYGREGSGGASCYQPSWPL* 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g3435 275 Pfam Helix-loop-helix DNA-binding domain 168 215 IPR011598 GO:0046983
Aev05g3435 275 SMART finulus 170 220 IPR011598 GO:0046983
Aev05g3435 275 CDD bHLH_AtBPE_like 154 239 - -
Aev05g3435 275 Gene3D - 161 231 IPR036638 GO:0046983
Aev05g3435 275 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 164 214 IPR011598 GO:0046983
Aev05g3435 275 MobiDBLite consensus disorder prediction 141 169 - -
Aev05g3435 275 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 162 230 IPR036638 GO:0046983
Aev05g3435 275 MobiDBLite consensus disorder prediction 114 132 - -
Aev05g3435 275 PANTHER TRANSCRIPTION FACTOR BEE 1 2 274 - -
Aev05g3435 275 MobiDBLite consensus disorder prediction 114 169 - -
Aev05g3435 275 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 2 274 IPR024097 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g3435 Aev-Chr5 33777277 33778744 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev05g3435 45 275 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G73830 51.867 1.09e-62 196
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Aev05g3435 HLH 3.8e-05 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g3435 - - gmx:100806942 329.717
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev05g3435 05 33777277 33778744 Aev05g3435 05 33777277 33778744 ECH