Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g3429 ATGGAAGAAAGTCTACCTCCTGGGTTTAGGTTCCATCCAACAGATGAAGAGCTCATAACATATTATCTTACAAGGAAAGTCTCTGAAACTGGATTCACTTCCAAAGCTATAGCTGTTGTTGATCTCAACAAGTCTGAACCTTGGGACCTTCCAGGTAAGGCATCAATGGGAGAAAAGGAATGGTATTTTTTCAGCTTGAGAGACCGAAAGTATCCAACAGGACTGAGAACAAACCGTGCAACGGAATCAGGGTACTGGAAAACAACAGGAAAAGACAAGGAAATATTTCGTGCTGGGGTTCTGGTTGGAATGAAGAAAACCCTAGTCTTCTATAAGGGCAGAGCCCCCAGGGGTGAGAAGAGCAATTGGGTTATGCATGAATATCGTTTGGAAAACAAGAATCCCTTTCGATCAAAGGATGAGTGGGTGGTTTGTAGGGTTTTCCAAAAGAGCACAGCAGCGAAAAAACCACAACAGTCATCATCCTCACAACCTGAGTCCCCATGTGACACAACCTCAATGGTCAATGAATTTGGTGATGTTGAGCTCCCAAATCTAAACAACATTGCTAATTCATCATCAAGTAACAATAATAACATTATTATTTCAGCACAATCTTACAATGTTGATCATCTAAGTAACAACAATGTTAACACAAACATGAACTTGGCAATGAATTGGCCTGCTGGAGCATCAAGTGATCAAATTATTCCCTCTCTTCCACCACCAATCACATGGCCTTTGCTCAATCCAAACACCCTTTCTATGAATTCCTTGATTCTCAAGGCATTACAGCTTAGGAATTATCAACAGAGAGAAGCTACTATTAATACAGATCATCATTTTTCAACATTTATGCCTAATCAAGGAGGAGTTTCTCATGTTGGAACAGATCTAGTAGGTTCCAATAACCTCAACGTGTCTTCTTCGAAAGTTCTAGAATGTATGCCACATCAGCAGGAGCAACCATTCAATTTGGACTCCATCTGGTGA 993 0.4068 MEESLPPGFRFHPTDEELITYYLTRKVSETGFTSKAIAVVDLNKSEPWDLPGKASMGEKEWYFFSLRDRKYPTGLRTNRATESGYWKTTGKDKEIFRAGVLVGMKKTLVFYKGRAPRGEKSNWVMHEYRLENKNPFRSKDEWVVCRVFQKSTAAKKPQQSSSSQPESPCDTTSMVNEFGDVELPNLNNIANSSSSNNNNIIISAQSYNVDHLSNNNVNTNMNLAMNWPAGASSDQIIPSLPPPITWPLLNPNTLSMNSLILKALQLRNYQQREATINTDHHFSTFMPNQGGVSHVGTDLVGSNNLNVSSSKVLECMPHQQEQPFNLDSIW* 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g3429 330 ProSiteProfiles NAC domain profile. 5 150 IPR003441 GO:0003677|GO:0006355
Aev05g3429 330 Gene3D NAC domain 14 155 IPR036093 GO:0003677|GO:0006355
Aev05g3429 330 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 2 270 - -
Aev05g3429 330 MobiDBLite consensus disorder prediction 153 175 - -
Aev05g3429 330 MobiDBLite consensus disorder prediction 153 174 - -
Aev05g3429 330 PANTHER BNACNNG63190D PROTEIN 2 270 - -
Aev05g3429 330 Pfam No apical meristem (NAM) protein 6 130 IPR003441 GO:0003677|GO:0006355
Aev05g3429 330 SUPERFAMILY NAC domain 3 150 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g3429 Aev-Chr5 33733420 33736262 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev05g3429 1 330 NAC Transcription Factor Family AT3G18400 57.227 1.88e-119 345
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Aev05g3429 NAM 1.1e-40 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g3429 - - gmx:100787111 445.277
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev05g3429 05 33733420 33736262 Aev05g3429 05 33733420 33736262 ECH