Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g3425 ATGCGACTCAGCTGCAACGGTTGTCGTGTCCTCCGCAAAGGTTGCACCCCGGACTGCCCCATACGATCCTGCCTCCACTGGATCAAATCCCCCGAATCGCAAGCCAACGCCACCCTCTTCCTCGCCAAGTTCTACGGCCGCGCCGGCCTCCTCAACCTCCTCACCGCCGGCGACCCTCAACTCCGCCCAGCTATTTTTAGATCTTTGCTCTATGAAGCTTGTGGGCGGATAGTGAACCCGGTTTTCGGTTCGACCGGGTTGCTCTCTAACGGAAGCTGGCACTTGTGCCAAGCCGCAGTTGAAGCCGTTCTTCGCGGCGCGCCGATTCAGCGCGTTTCTTTTGACGGCTCTAGCCCGCAGCTAAATCCGTTGGATATTCGCCACGTGGCGAAGAGTGGGAACCCGTGCGGCTGCGATGAGGCCCTTAAGTCGCGGGGGAGCAGGTTCAAGCGACGCGCCAATAAGCCGAAGCCGGGAACGGAGCTTGGCGTGGCTGAATTGTTGGCGACTCAGAACGAGAACGAGTTGGATGAGTCAGTGAGTCCTGACTCGGGGTCTGGGGTGAGTGAGCATAGGAGTGTTGTTGGGGAAGCTGATAGCGGCTCCGTTGAGAGCGCGGAGCCGGCTCGAGCCGATGATGGAGAACTTGAGCTGGAGTTGACTTTGGGGTTTCGGTGGGGTCCAATGAAGACTAGTGAGCAAATCAATGGCTCTGATGTCGACACGTGTAGGGGATGA 738 0.5867 MRLSCNGCRVLRKGCTPDCPIRSCLHWIKSPESQANATLFLAKFYGRAGLLNLLTAGDPQLRPAIFRSLLYEACGRIVNPVFGSTGLLSNGSWHLCQAAVEAVLRGAPIQRVSFDGSSPQLNPLDIRHVAKSGNPCGCDEALKSRGSRFKRRANKPKPGTELGVAELLATQNENELDESVSPDSGSGVSEHRSVVGEADSGSVESAEPARADDGELELELTLGFRWGPMKTSEQINGSDVDTCRG* 246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g3425 245 ProSiteProfiles LOB domain profile. 3 109 IPR004883 -
Aev05g3425 245 Pfam Lateral organ boundaries (LOB) domain 4 102 IPR004883 -
Aev05g3425 245 MobiDBLite consensus disorder prediction 173 216 - -
Aev05g3425 245 PANTHER LOB DOMAIN-CONTAINING PROTEIN 38 1 226 - -
Aev05g3425 245 PANTHER LOB DOMAIN-CONTAINING PROTEIN 40 1 226 - -
Aev05g3425 245 MobiDBLite consensus disorder prediction 173 188 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g3425 Aev-Chr5 33703012 33703852 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev05g3425 1 222 AS2 family AT3G02550 49.782 7.15e-68 208
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Aev05g3425 LOB 1.5e-22 No_clan