Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g3421 ATGCCAGGATTTCCAAGTAACATTGTGAAGGAAGAAATGAAATGCAAAGGAAAGGAGAAAGTTATAGCAAAAGAAGAAAACATGAACAGCATGAAGAGAATTAGGATCATTTATAGTGACCCAGATGCCACAGATTATTCTTCAAGTGAAGATGACAAGTTTTTGATGAATGATCATAAAAAACAACATTATGGTCCTAAGAAATTTGCCAAGGAAATCTTGCTTCCATGCATGTCAACCAAATCATCATCATGTGATGACAATTCTTCAGAACAACATCAAACCAGAAATGAAAGGATCAAACCGAGTACTGACATTTCTTGTAACGGTAGGAAGAGAAGACCAACCAGCAAATACAAAGGTGTTCAGCGCAGGAAATGGGGAAAGTATGTTGCAGAGATCAAGGACCCCATTAGAGGTGTCAGGCTGTGGCTTGGTACTTTTGAAACCGAAGAAGAGGCTGCGGCGGCTTACGAGAAGAAGAGGCTAGAAATTGAGGATTCATTGAAGGCTTTGAGCAAAAGGGTTGGTGCATTGGCATTGGAAGAAGATAGCAAACAAGCATTGCCATTGCCATTGTCATTGTCTTATCCATCACCATCATCTGTGCTTGATGATGCCACAGCTTCAAAGGCTACTTCATCTGGAAATGACAGCAGCAACAGTTCAATTGAAGTCAAGATCAACGCCGAAACTAGTTCTGCTGCCGTAGGAGGAGACAGTGTTCCGGAGCCCTTTTATGGTGAGGATTATTCAGTTCAGCATTGGCTTGAGGAGTCAATTGTGCCATCATTGCTTGGAGATGGTTTTGATGATTTCTTGTTCAATGACAATTCTAAGTGGAATGTGGAAAATGGTCAAGGTAGCAGCACTCTTCCATCTATTGAGACTGATTTTGATGATGCAGACTTGGCTTGGATTGATGAAGCTCTGAATTTGTAA 942 0.4108 MPGFPSNIVKEEMKCKGKEKVIAKEENMNSMKRIRIIYSDPDATDYSSSEDDKFLMNDHKKQHYGPKKFAKEILLPCMSTKSSSCDDNSSEQHQTRNERIKPSTDISCNGRKRRPTSKYKGVQRRKWGKYVAEIKDPIRGVRLWLGTFETEEEAAAAYEKKRLEIEDSLKALSKRVGALALEEDSKQALPLPLSLSYPSPSSVLDDATASKATSSGNDSSNSSIEVKINAETSSAAVGGDSVPEPFYGEDYSVQHWLEESIVPSLLGDGFDDFLFNDNSKWNVENGQGSSTLPSIETDFDDADLAWIDEALNL* 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g3421 313 SMART rav1_2 118 176 IPR001471 GO:0003700|GO:0006355
Aev05g3421 313 MobiDBLite consensus disorder prediction 204 224 - -
Aev05g3421 313 PRINTS Ethylene responsive element binding protein signature 141 157 IPR001471 GO:0003700|GO:0006355
Aev05g3421 313 PRINTS Ethylene responsive element binding protein signature 119 130 IPR001471 GO:0003700|GO:0006355
Aev05g3421 313 Coils Coil 155 175 - -
Aev05g3421 313 MobiDBLite consensus disorder prediction 91 112 - -
Aev05g3421 313 Pfam AP2 domain 117 166 IPR001471 GO:0003700|GO:0006355
Aev05g3421 313 PANTHER - 4 312 - -
Aev05g3421 313 Gene3D AP2/ERF domain 117 171 IPR036955 GO:0003700|GO:0006355
Aev05g3421 313 SUPERFAMILY DNA-binding domain 117 166 IPR016177 GO:0003677
Aev05g3421 313 MobiDBLite consensus disorder prediction 80 120 - -
Aev05g3421 313 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 4 312 - -
Aev05g3421 313 CDD AP2 117 149 IPR001471 GO:0003700|GO:0006355
Aev05g3421 313 ProSiteProfiles AP2/ERF domain profile. 118 175 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g3421 Aev-Chr5 33683530 33684471 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev05g3421 9 304 AP2-EREBP Transcription Factor Family AT1G68550 30.097 3.16e-24 98.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Aev05g3421 AP2 1.1e-10 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g3421 - - aip:107642108 272.322
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev05g3421 05 33683530 33684471 Aev05g3421 05 33683530 33684471 ECH