Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g3392 ATGGCGAGTAGGGTGAAGGAAGATGAGAAGAACGAACGCGTAATTCGCGGTCTTCTGAAGCTGGAACCGAATCGAAGATGCATTAACTGCAACAGCTTGGGTCCACAATATGTGTGCACAAATTTTTGGACCTTTGTTTGCACAAGCTGCAGTGGAATACACCGGGAATTTACCCATAGAGTAAAATCAATTTCAATGGCTAAATTTACTTCCCAAGAAGTTAGTGCACTTCAAGAAGGAGGAAATCAGCCCGCAAAAGAAATTTATTTTAAAGAATGGGATGCACAACGTCATTCTTTCCCTGATAGCAGTAATGTTGAACGGCTCCGAGACTTTATTAAGCATGTTTACGTGGATAGAAGATTCAGTGGAGAGAGGGCTTTTGACAAACCCCCAAGAGGAAAGCCAGCTGATAAAGACGATTTCTATGAAAACAAGAGAGAGTCGTATCAGGGAGGACCTAAAAGCCCACCATATGAGGAAACATATGAACGCCGTTTTAGTGGCAGGTCTAGTCCTGGTGGAAGAAGTCCAGGGTATGATCAAGAAAGTAGGCAATATGGCGATTATAAGAGAAGCCCTGGTCGTCCTCCAATAATCAATGATTGGCGTCGTGAAGATCGTCGAATATCTGATGGGGAATATAAGGTAGATAGCCAATCTCCTGAGCGATCCACGAGTTCTTCAAGCTCACCTATTGTCCGGCCTGTTAGAGAGATTTTGGGAGAAAATGTAGTACCCCTTCGGATAAGTGAACCACCCAAACCGAACACTGGAAGGACTGCTGATGGCTCAGCATTGACACAGAGAACTGCATCTTCCAGCAGCTTGGCATCCAGCAATGGAAACCAAACAGATGTTAAGCTTGAGACTACAAAGAGCCTTATTGATTTCGATGCTGATCCTGAACCACCTGTTGCTCCTGCAATTCCTCAAACCCCGCAAACTACTGTGCCTCAACCTGTTGTGCAGTCAGCAAATCCCAGTGCTGACAATTGGGCCTCTTTTGATGTTGCTCCGGAAGTAAAAGCAACTCCAAGCCCCATGAATGCAAATCCACTCGACTCTGTCCTGTCCCAATTGTCAATGCCAGCATCTGGAGTCCAAGGTGGTCCACATGTTGCAGCAGCTATTCCTGGGGGCAATGTGACAACTTTAATGAGGATGGGTGACTCATCTGTTTCACCTGCAGTAGCTGCCCCAACATCAACTTTTGCTTCTGCTTCTGGAGCTGCAAGTGTTAGCGGTTTATCGGTTTTTCCACCCAGTGGCGGTGCAGGACCATCTTCTGGACTTGCAACAGGACAGTGGGCCAGTTTGCAAAACCAGCAATCATTTTTCCCTGCTAATGTTAGTCAGCCTACTCAACAATTTGCACCACCTGTAGGTGGAGCTGCAACCAATCAGCCGTGGAATATACCTTCTGTACAAGGGCATCCTAACACATCAATGCCACATGCATATCATCATACTTCAAATCCTGCTAAAGAAGTTGCATCCAGTGTTGTTTCGCAACCTTCTGCTGAAGAAGTAAAAGCAAGTGGAAGAAAAGAACTTCCTGAGGATCTGTTCACTGTAAGATATCCATCCTACCCTGCTCCAGTTCCAGGTTGGCAAATGGGTCATCCCCATGGCATGGTTCATCCCCAAGGCATGGGTCATCCCCACGGCATGGGTGTCTATATGCAATATAATAATGTCATGCCCATACCAAGTTTTCCGCAGCCATCAAAATCAGTAAATCCGTTTGATGTTGGCAGTGAATCAACCCCAGGTCAAGCGCCAACTTTTCCTTCCATGTCATCTTTGCACGGTGCTCTGCCTAATATACCACATTCAGGCACAGTGCACCCTTCAAGTTTGGGCAATCCATCACATGCTTTGAATCCACCCCAGTCATCACCACCAGTCCTGCCTGCACAAGCACAAACTCATGCATCAGCATTGGGATCAAGGGGATACATGGGACAACAAATGCAACCAACTAACATACATACACCAAGGCCAGAAGCTGGTAGTTTTGGTACTGGTGGAGGTGTTTTTGGTTTTTCAAATCCAGATCAGCAGCTAATTGGTGGGTCGTCAAACACTCCCAATCCTAATCAGTTCCCTGCTGGAGGAATGGGGCTAATCGGTGGGTCGTCAAACATTCCCAATCCTAATCAGTTTCCTGCAGGAGGAATCGGGCCAATGGGTGGTTTGTCAAACAGTCCCAATCCTAATCAGTTCCCTGCAGGAGGAATGGGGCAAACCGGTGGGTCGCCAAACATTCCCAATCCTAATCAGTTCCCTGCAGGAGGAAATCCATTCGGGTGA 2316 0.468 MASRVKEDEKNERVIRGLLKLEPNRRCINCNSLGPQYVCTNFWTFVCTSCSGIHREFTHRVKSISMAKFTSQEVSALQEGGNQPAKEIYFKEWDAQRHSFPDSSNVERLRDFIKHVYVDRRFSGERAFDKPPRGKPADKDDFYENKRESYQGGPKSPPYEETYERRFSGRSSPGGRSPGYDQESRQYGDYKRSPGRPPIINDWRREDRRISDGEYKVDSQSPERSTSSSSSPIVRPVREILGENVVPLRISEPPKPNTGRTADGSALTQRTASSSSLASSNGNQTDVKLETTKSLIDFDADPEPPVAPAIPQTPQTTVPQPVVQSANPSADNWASFDVAPEVKATPSPMNANPLDSVLSQLSMPASGVQGGPHVAAAIPGGNVTTLMRMGDSSVSPAVAAPTSTFASASGAASVSGLSVFPPSGGAGPSSGLATGQWASLQNQQSFFPANVSQPTQQFAPPVGGAATNQPWNIPSVQGHPNTSMPHAYHHTSNPAKEVASSVVSQPSAEEVKASGRKELPEDLFTVRYPSYPAPVPGWQMGHPHGMVHPQGMGHPHGMGVYMQYNNVMPIPSFPQPSKSVNPFDVGSESTPGQAPTFPSMSSLHGALPNIPHSGTVHPSSLGNPSHALNPPQSSPPVLPAQAQTHASALGSRGYMGQQMQPTNIHTPRPEAGSFGTGGGVFGFSNPDQQLIGGSSNTPNPNQFPAGGMGLIGGSSNIPNPNQFPAGGIGPMGGLSNSPNPNQFPAGGMGQTGGSPNIPNPNQFPAGGNPFG* 772
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g3392 771 MobiDBLite consensus disorder prediction 126 148 - -
Aev05g3392 771 MobiDBLite consensus disorder prediction 578 628 - -
Aev05g3392 771 CDD ArfGap_AGFG 12 122 - -
Aev05g3392 771 MobiDBLite consensus disorder prediction 126 286 - -
Aev05g3392 771 Pfam Putative GTPase activating protein for Arf 13 123 IPR001164 GO:0005096
Aev05g3392 771 SMART arf_gap_3 12 130 IPR001164 GO:0005096
Aev05g3392 771 MobiDBLite consensus disorder prediction 198 219 - -
Aev05g3392 771 MobiDBLite consensus disorder prediction 306 332 - -
Aev05g3392 771 SUPERFAMILY ArfGap/RecO-like zinc finger 11 123 IPR037278 -
Aev05g3392 771 MobiDBLite consensus disorder prediction 261 286 - -
Aev05g3392 771 PRINTS HIV Rev interacting protein signature 24 43 IPR001164 GO:0005096
Aev05g3392 771 PRINTS HIV Rev interacting protein signature 61 82 IPR001164 GO:0005096
Aev05g3392 771 PRINTS HIV Rev interacting protein signature 43 60 IPR001164 GO:0005096
Aev05g3392 771 MobiDBLite consensus disorder prediction 578 639 - -
Aev05g3392 771 MobiDBLite consensus disorder prediction 220 234 - -
Aev05g3392 771 Gene3D Arf GTPase activating protein 2 130 IPR038508 -
Aev05g3392 771 MobiDBLite consensus disorder prediction 713 771 - -
Aev05g3392 771 PANTHER ARFGAP/RECO-RELATED 1 708 IPR044820 GO:0005096
Aev05g3392 771 ProSiteProfiles ARF GTPase-activating proteins domain profile. 12 130 IPR001164 GO:0005096
Aev05g3392 771 PANTHER ARF GTPASE ACTIVATOR 1 708 - -
Aev05g3392 771 MobiDBLite consensus disorder prediction 734 763 - -
Aev05g3392 771 MobiDBLite consensus disorder prediction 316 332 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g3392 Aev-Chr5 33482697 33487984 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev05g3392 12 122 C2H2 Transcription Factor Family AT4G21160 30.645 2.70e-11 63.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g3392 - - gmx:102669541 886.715
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev05g3392 05 33482697 33487984 Aev05g3392 05 33482697 33487984 ECH