Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g3353 ATGGGGGAAGGTGAAGGAGGGGGTGATTGCGGTCCGAAGAATGTGACGTCATCGGATTCTGCTGCAACGACGCCGTTGGATGCTCCGGCGGCCAAGAAGCTCGCCAGGCAGCTCGATTTCACTGGCTTTCCCGAACAACAACAACCGCAGCCGCAATCGCAACCTCAATTGCTTTCTCAGGTGCAGGTGCAGCAGCAGCAGATTGTGGCTCAGGTTGTGGCGGCGCAGCCCCAGGTTGCTACACAGCCACCGGTGGTTGTGAAATCAGTGCTGCCACCTGTGCCTCCGCAGTCTCCTTTGGTGAGGATGGGGAAACCGGATTCTCCCAAATCCAGATCAAGAGCTAACTTTGAAATGAAAGAAGCTACTCCAAAGAAGCAAAAGCAGTGCAATTGTAAACACTCTAAATGTTTAAAGCTATATTGTGAATGTTTTGCGTCGGGAATATATTGTGACGGTTGCAACTGTGTAAATTGTTGTAACAATGTCGAAAATGAAGCTGCTAGACGAGAAGCTGTTGAGAATACTTTAGAGCGCAATCCTAATGCATTTAGGCCAAAGATTGCAAGCAGTCCTCATGGAACACGTGATAGCAGGGAGGAGGCTGGGGAAGTTTTGATATTAGGAAAGCATAACAAGGGATGTCATTGTAAAAAATCTGGGTGCCTCAAGAAGTATTGTGAATGCTTCCAAGCCAACATTCTTTGTTCTGAAAATTGTAAATGCATGGACTGCAAGAATTTTGAGGGAAGTGAAGAGAGACAGGCTTTGTTTCATGGAGATCAAAATAACATGACATATATTCAGCAGGCAGCAAATGCTGCCATAACTGGAGCTATTGGCTCCTCTGGTTATTCATCGCCTCCAGTATCCAAGAAAAAAAAGGGTCAGGAACTCTTCCTTGGGCCAGCAGCCAAGGATCCACCCGTTAGCAAGTTGGGACAACAGGTAAACCATGTCAGGGGTCCAGCACCTTCCTCATCCTTGCCCTCTGTCCCTGGTGCTCGTGTTGGATCTGCAACGCTAGGTCCTTCAAAATTTATGTACAGGTCTCTTTTAGCGGACATCATACAACCACAGCACCTGAAAGAGCTTTGTTCAGTTCTGGTGCTAGTATCTGGGCAAGCTGCGAAGACACTTGCAGACCAGAAAAATTTACTGGAAAAGCACGCAGAAGATCAGACAGAAACTTCCCTTGCTTCTTCCAATCAATCACAATTACCAAATCAAAAGGAAGGTGATGTTGAGAAAGCTATGGCTGATGACTGTTCGAGTGCAAACCAAACAGAGAAAAACAGCCCAGATAATTCAAGTTCAGATGGTGCTGATGTCCCAAAAAGTAGGCCAATGTCTCCCGGGACTTTAGCGCTGATGTGTGACGAGCAAGATACGTTCATGACAGCTGCCTCTCCCATTGGAACAATGGCCCATGTCTGCAACACATCGTCGCAGTTTCCTTATGGACAAGGAATGACAGAAGTCTATGCAGAGCAAGAAAGGATTGTATTAACAAAGTTTAGAGATTTTCTTAATAGAGTTATCACAATGGGAGAAATAAACGAAACAAAGTGTTCCTCATTAGCCAGAAGTGAGTTGGAGAGTCAGAAGGATCCAAATCCAATCAACAATGGCACTGGAAATGCCAGTACCGAGACTCTGCATCAGCAGGGAGCCACTGGCAACGGTGTCGCCAAAGCTGTAGTTCCACCTGCGGCCGCAACTTCAGCCTCTAAGATCTCTGGTAATGTTGTTCCTGAAAATGGGGAGACTAAGCTGAAGACAGAAAAATAG 1791 0.4651 MGEGEGGGDCGPKNVTSSDSAATTPLDAPAAKKLARQLDFTGFPEQQQPQPQSQPQLLSQVQVQQQQIVAQVVAAQPQVATQPPVVVKSVLPPVPPQSPLVRMGKPDSPKSRSRANFEMKEATPKKQKQCNCKHSKCLKLYCECFASGIYCDGCNCVNCCNNVENEAARREAVENTLERNPNAFRPKIASSPHGTRDSREEAGEVLILGKHNKGCHCKKSGCLKKYCECFQANILCSENCKCMDCKNFEGSEERQALFHGDQNNMTYIQQAANAAITGAIGSSGYSSPPVSKKKKGQELFLGPAAKDPPVSKLGQQVNHVRGPAPSSSLPSVPGARVGSATLGPSKFMYRSLLADIIQPQHLKELCSVLVLVSGQAAKTLADQKNLLEKHAEDQTETSLASSNQSQLPNQKEGDVEKAMADDCSSANQTEKNSPDNSSSDGADVPKSRPMSPGTLALMCDEQDTFMTAASPIGTMAHVCNTSSQFPYGQGMTEVYAEQERIVLTKFRDFLNRVITMGEINETKCSSLARSELESQKDPNPINNGTGNASTETLHQQGATGNGVAKAVVPPAAATSASKISGNVVPENGETKLKTEK* 597
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g3353 596 MobiDBLite consensus disorder prediction 396 411 - -
Aev05g3353 596 MobiDBLite consensus disorder prediction 1 57 - -
Aev05g3353 596 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 213 247 IPR005172 -
Aev05g3353 596 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 127 162 IPR005172 -
Aev05g3353 596 SMART CXC_2 125 165 IPR033467 -
Aev05g3353 596 SMART CXC_2 210 251 IPR033467 -
Aev05g3353 596 MobiDBLite consensus disorder prediction 305 335 - -
Aev05g3353 596 PANTHER TESMIN/TSO1-RELATED 30 577 IPR028307 -
Aev05g3353 596 PANTHER PROTEIN TESMIN/TSO1-LIKE CXC 5 ISOFORM X1 30 577 - -
Aev05g3353 596 ProSiteProfiles CRC domain profile. 126 250 IPR005172 -
Aev05g3353 596 MobiDBLite consensus disorder prediction 528 559 - -
Aev05g3353 596 MobiDBLite consensus disorder prediction 422 444 - -
Aev05g3353 596 MobiDBLite consensus disorder prediction 528 596 - -
Aev05g3353 596 MobiDBLite consensus disorder prediction 391 454 - -
Aev05g3353 596 MobiDBLite consensus disorder prediction 41 57 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g3353 Aev-Chr5 33175311 33180981 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev05g3353 1 533 CPP Transcription Factor Family AT4G29000 55.154 0.0 552
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CPP Aev05g3353 TCR 3.2e-12 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g3353 - - gmx:100818116 853.973
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev05g3353 05 33175311 33180981 Aev05g3353 05 33175311 33180981 ECH