Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g3351 ATGATGGACACAGACCCACCTCCACCATCGAAGAAGAAGAGCTGGACCATACACACCCGACCGGAAATAATCGCCAAGTACGAGGTTCTGGATCGTGTCGGCTCAGGCGCCTACGCCGAAGTCTACCGCGGGCGACGACTCTCCGACGGCTTGACGGTGGCGCTGAAGGAGGTCCACGACGGTCGATCGGCGTCCCGGGAGATTGAGGCCTTAAGGCTGCTTCAGGGCTCACAAAACGTCGTCGTAATGCACGAGTTCTTCTGGCGGGACGATGATGAGGACGCGGTGATCGTGCTCGAGTTCCTCAGAACTGACCTCGCCACCGTGATTGCGGAAGCTTCTGGTGGTCTGGGTGTTGGTGAATTGAAGAGGTGGATGATGCAGGTTCTTAGTGGTGTGGACGCTTGCCATAGGAACATGATCGTGCATAGAGACTTGAAACCTTCGAATTTTTTGGTTTCTGATGATGGGATGCTCAAGTTAGCGGATTTTGGACAGGCAAGGATTCTGATGGAGGGTGGATTTGATTCTACAGAGGAGAACCCGCCTCTGTATGAACATGATGCTCCAACTCCTCCTCCTGAGAGTTCGTTTCAACACCCTGAGTCTTCTGTAACCCACGACGAATATTTCAGAGTCCTTGATGAGATGAAGAACAAGAGCGTCGCCTACGACACCGATAAGGACACAAACAACCAAGATGGGAACACTTCCTGTCTTGCAACATGCACAACAAGCGACATTGATGATGATCTCTGGAAGGCTGCTTCTTTTACATTCGAAGCCGAGGAGGATCGGAGGAACGAGCTTGGTTGTCTCACATCCGGCGTCGGAACTCGTTGGTATAAGGCACCTGAACTGCTTTATGGATCAACATGCTATGGTCTAGAGGTTGATCTATGGTCTTTGGGGTGTATATTTTCAGAACTGTTAACACTGAAGCCCTTGTTTCCTGGGGCTTCTGATACAGATCAATTCAGCAGAATCATCAGTGTATTGGGGAACATTGATGAGGAGGTTTGGCCTGGTTGTTCCAAATTTAGTGATTATGCTGCAGCAGCAATATCAAATTGTATGGTGGAAGAGCCTACTGGTATTGAAGCCTGCATGGAGAAGTGCTCAGATGATGAAGTGTCTCTGGTTAAGAAGCTGGTTTGTTATGATCCAGCAAGGAGAGCCACAGCAATGGAGTTGCTTCATGATAAGTACTTTAGTGAGGAGCCTCTTCCTGTTCCTGTTTCTGAGCTGCGTGTTCCTTTGACAAGAAATGGACAAGGTGAAGACTGA 1287 0.4949 MMDTDPPPPSKKKSWTIHTRPEIIAKYEVLDRVGSGAYAEVYRGRRLSDGLTVALKEVHDGRSASREIEALRLLQGSQNVVVMHEFFWRDDDEDAVIVLEFLRTDLATVIAEASGGLGVGELKRWMMQVLSGVDACHRNMIVHRDLKPSNFLVSDDGMLKLADFGQARILMEGGFDSTEENPPLYEHDAPTPPPESSFQHPESSVTHDEYFRVLDEMKNKSVAYDTDKDTNNQDGNTSCLATCTTSDIDDDLWKAASFTFEAEEDRRNELGCLTSGVGTRWYKAPELLYGSTCYGLEVDLWSLGCIFSELLTLKPLFPGASDTDQFSRIISVLGNIDEEVWPGCSKFSDYAAAAISNCMVEEPTGIEACMEKCSDDEVSLVKKLVCYDPARRATAMELLHDKYFSEEPLPVPVSELRVPLTRNGQGED* 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g3351 428 SUPERFAMILY Protein kinase-like (PK-like) 19 410 IPR011009 -
Aev05g3351 428 Gene3D Transferase(Phosphotransferase) domain 1 265 406 - -
Aev05g3351 428 PANTHER CYCLIN-DEPENDENT KINASE 10 23 411 - -
Aev05g3351 428 PANTHER CELL DIVISION PROTEIN KINASE 23 411 - -
Aev05g3351 428 ProSitePatterns Protein kinases ATP-binding region signature. 33 56 IPR017441 GO:0005524
Aev05g3351 428 Gene3D Transferase(Phosphotransferase) domain 1 17 204 - -
Aev05g3351 428 SMART serkin_6 27 404 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aev05g3351 428 Pfam Protein kinase domain 269 404 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aev05g3351 428 Pfam Protein kinase domain 27 174 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aev05g3351 428 MobiDBLite consensus disorder prediction 175 202 - -
Aev05g3351 428 ProSiteProfiles Protein kinase domain profile. 27 404 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aev05g3351 428 ProSitePatterns Serine/Threonine protein kinases active-site signature. 141 153 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g3351 Aev-Chr5 33163381 33164906 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev05g3351 14 428 Core Cell Cycle Gene Families AT4G28980 60.137 0.0 519
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CCRK Aev05g3351 Pkinase 8.8e-21 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g3351 - - gmx:548056 624.78
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev05g3351 05 33163381 33164906 Aev05g3351 05 33163381 33164906 ECH
Aev03g3278 03 30819125 30821021 Aev05g3351 05 33163381 33164906 PCT