Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g3346 ATGAATAGAGGTGTTGTGCAGAGCTCGCCGGTGCAACAAATGATGGCCGGAAACCCTACATGGTGGAACATCAATAGCATGAGGCCGCCTCCTCCTCCTTCTCATCACCATCAAGCTCCTCCTAATTTCTTGTCCACCACCACTACTCCTTCAAACTTTCTCAACCCATATTCTTCTTATTCTCTTCCTTTCCCTTCTTGGCATGACAATAATCAAGAGCTTCCTGAGTCTTGGAGCCAACTACTCATGGGTGGAGTTGTGGGTGAAGAAGATAAGGCAAATAGTATGGGCCAATTTGTTGTTGAGAGCAAGAATAATAATAAGTTGGAGAACTGGGAAGAGGATCACCAAATGCTAATGAGTCATCAAGCTCCAAATAATGCATCTCTTGTTGATGTCAAACAAGAAAGCTCAGTTAATAGCTATGTTTATGGGCATCATGGAAATACCAATGAAGAACTACTTCAGCCATTATCAAAGCCTACATCTTGGTCACCAAACTCATGTGTCACAAGTTTTACCACCAATACCACCGGCACCAACAACATGCTGGATTTCTCCAACAACAATAATAATAACAGTAATGATGTAAGGCATCCGCCACCACCGCCACCAGATCGATCCTCTGAGTGCAACAGCTCTGGAGGTGGAGGGGCACTGAAGAAAGCTAGGGTTCAGCCATCCACAGCTCAATCAACCTTCAAGGTCAGGAAGGAGAAGTTAGGTGACAGAATTACTGCCCTTCATCAGCTGGTTTCCCCCTTTGGCAAGACTGACACAGCGTCTGTGTTGTTAGAAGCTATTGGGTATATTAGATTCCTTCAGAGTCAAATTGAGGCCCTTAGCTTACCATACTTAAGCAATGGATCAGGAAATTCCAGGCATCAACATTCTGTTCAGGGAGAGAAGAATTGTATATTCCCTGAAGACCCCGGTCAGCTGCTGAATGAAAACTGCTTGAAGAGGAAAGCAGCTAGTGAGCAGGAGTCTCAAGAAGAACCGAAGAAGGACCTGAGGAGTAGAGGGCTATGTTTGGTGCCAGTGTCATGCACACTCCAAGTTGGGAGTGACAATGGTGCTGACTATTGGGCACCTGCCCTTGGAGGGGGCTTTCGGTAG 1119 0.4584 MNRGVVQSSPVQQMMAGNPTWWNINSMRPPPPPSHHHQAPPNFLSTTTTPSNFLNPYSSYSLPFPSWHDNNQELPESWSQLLMGGVVGEEDKANSMGQFVVESKNNNKLENWEEDHQMLMSHQAPNNASLVDVKQESSVNSYVYGHHGNTNEELLQPLSKPTSWSPNSCVTSFTTNTTGTNNMLDFSNNNNNNSNDVRHPPPPPPDRSSECNSSGGGGALKKARVQPSTAQSTFKVRKEKLGDRITALHQLVSPFGKTDTASVLLEAIGYIRFLQSQIEALSLPYLSNGSGNSRHQHSVQGEKNCIFPEDPGQLLNENCLKRKAASEQESQEEPKKDLRSRGLCLVPVSCTLQVGSDNGADYWAPALGGGFR* 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g3346 372 MobiDBLite consensus disorder prediction 180 196 - -
Aev05g3346 372 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 235 286 IPR036638 GO:0046983
Aev05g3346 372 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 16 358 - -
Aev05g3346 372 CDD bHLH_AtbHLH_like 233 282 IPR045239 -
Aev05g3346 372 MobiDBLite consensus disorder prediction 180 233 - -
Aev05g3346 372 Gene3D - 230 286 IPR036638 GO:0046983
Aev05g3346 372 PANTHER OS05G0228400 PROTEIN 16 358 - -
Aev05g3346 372 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 225 274 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g3346 Aev-Chr5 33124331 33129756 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev05g3346 1 314 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G29100 47.123 2.60e-73 230
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g3346 - - gmx:100785156 473.011
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev05g3346 05 33124331 33129756 Aev05g3346 05 33124331 33129756 ECH