Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g3345 ATGTCTGTGCCATCAGAGCAAGGCTATGTAGGCTTATCTGAGTCTTCTTCTTCTTCAATGGAAAACTCTGATAAATTTTCTCAGAGGGCAAAAACCGCCTTGAACCTCAAAGCTACTGAGTTAAGGCTTGGCCTGCCTGGTTCTGAGTCACCAGAGAGGGATGACTATGATGTTGGTGTTGAGGACAAGAATGTGTACTCATTAGGGGTGTTGAAGAGTTTGGTGTCAGGGGCAAAAAGGGGTTTCTCTGATGCCATTGATGGTGGTTCTGGGAAGTGGATTCTATCTGGGAAAGGTGGATCTGAGGTTGGTGTTGCTAAAGATGCTGCCTTGTTCTCACCAAGGGGTGTTGCTAAAGATGGTGGTTCTGTTGTGAAAGAAAAGATTCCTCAGTCTCCAAAGCCAGTAGTGAATGACAAGAAGCCACAGATTTCTGCTCCTGCTGCTAAGGAACAGGTTGTGGGATGGCCACCAATCCGATCTTTCCGGAAGAACTCGATGGCGAATCAGCCTCAAAAGAATGAAGATGATCATGATGCAGAAGCCAAATCTGGTTGCCTTTATGTGAAAGTAAGCATGGATGGTGCTCCATACTTGAGGAAAGTGGATCTCAAACACTTTGCCACTTATAGAGAACTATCTTCAGCACTAGAAAAGATGTTCAGTTGTTTCACAATCAGTCAATGTGGCTCTCATGGTGTTTCTAGCCGTGATAAGATGAGCGAAAGTAGATTGATGGATCTGCTTCATGGTTCAGAATATGTGCTCACATATGAAGACAAAGATGGTGATTGGATGCTTGTTGGTGATGTTCCATGGGAGATGTTCACTGACTCTTGCAAGAGGTTGAGGATAATGAAGAGTTCTGAAGCAATTGGACTAGCACCAAGAGCCATGGAAAAGTGCAAAAGTCGGAACTAG 921 0.4452 MSVPSEQGYVGLSESSSSSMENSDKFSQRAKTALNLKATELRLGLPGSESPERDDYDVGVEDKNVYSLGVLKSLVSGAKRGFSDAIDGGSGKWILSGKGGSEVGVAKDAALFSPRGVAKDGGSVVKEKIPQSPKPVVNDKKPQISAPAAKEQVVGWPPIRSFRKNSMANQPQKNEDDHDAEAKSGCLYVKVSMDGAPYLRKVDLKHFATYRELSSALEKMFSCFTISQCGSHGVSSRDKMSESRLMDLLHGSEYVLTYEDKDGDWMLVGDVPWEMFTDSCKRLRIMKSSEAIGLAPRAMEKCKSRN* 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g3345 306 MobiDBLite consensus disorder prediction 128 150 - -
Aev05g3345 306 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 20 298 IPR003311 GO:0005634|GO:0006355
Aev05g3345 306 ProSiteProfiles PB1 domain profile. 186 288 IPR000270 GO:0005515
Aev05g3345 306 PANTHER AUXIN-RESPONSIVE PROTEIN IAA27 20 298 - -
Aev05g3345 306 Pfam AUX/IAA family 39 297 IPR033389 -
Aev05g3345 306 Gene3D - 180 300 - -
Aev05g3345 306 SUPERFAMILY CAD & PB1 domains 182 287 - -
Aev05g3345 306 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g3345 Aev-Chr5 33090297 33092914 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev05g3345 132 291 B3 DNA Binding Superfamily AT3G61830 28.125 4.91e-08 52.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Aev05g3345 AUX_IAA 1.2e-90 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g3345 K14484 - gmx:100803754 459.914
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev05g3345 05 33090297 33092914 Aev05g3345 05 33090297 33092914 ECH
Aev03g3274 03 30792594 30795185 Aev05g3345 05 33090297 33092914 PCT