Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g3334 ATGAACCCAATTGTTGCAATTAGAATTAGCCTCTTTGTTCTGTGTGCCTTATTCTCCAATGGTAGAGCACAAGGTGCACCTTCTTCAGGTGATGCTGTCTCAAATTTCCAACCAAGCCTTGCTGTGGTCATAGGAATCCTTGGCCTAATGTTCTCAGTCACATTCATTCTTCTCATGTATGCAAAATTCTGCCAAAGGGGTGTATTAGTCCCTCTTGGTGGTGGTGGTGGCCTAGAGAATCAACCAGCACTTGGAAGATCAAGGTCAAGATTCTCAGGAATTGACAAAACTGTGATAGAATCATTACCCTTCTTCAGATTCTCTTCACTCAAAGGGTCAAAAGAAGGTTTGGAATGTTCTGTTTGCTTATCAAAGTTTGAAGATGTTGAAATCCTAAGGCTATTGCCAAAGTGCAAGCATGCTTTTCACATTGACTGCATAGATCATTGGCTTGAGAAACACTCAAGTTGCCCTCTTTGCAGGCAAAAGGTGAATCCTGAGGACCAAACACTCTTCACATATTCAAACAGTTTAAGGAGGGTTCTGAACAGTTCAGGGGTAGCTGAAGAATCCAACTTAGAGCTATTTGTGCAGAGAGAGGAAGAACAACAACATGGTTCATCAAGAATATTCAGTATTGGAAGCAGCTTCAGGAAGATTATGAATAAGGATGTTAAGGAAGATGAACTGCCTATACAAAAAGTAAAAGAGGAAGAAGATGGTGATGGTGATGATGAAAACAAGGCTTATCATAAGCACAATCACAGGATTACTATTTCTGATGTTGTGTTCAAGCATAGGTGGAGCAGTGTGAGTTCTTCAGACCTAATGTTTCTGAACTCAGAGCTGCTCAATGATTCATCTAGCAGCAGATTCAACAACTTGGAAACAAATCACTCTGACATTGTTTCAAACACAAGAGGGGCAGAAACTGATCAAATCATGAACATAAAGGAGGAGATGGAGAGGAAGATTTCATTTGAGAACAGGGTTGGTGCCCTTAACAAGGCCAATATTAATACTAATATTAATAATAATAGTGTTCCTTCTACATCAGATTCTGCAACAAAGCAGATGAATCATCATCAAGGTGGTGAGAAAAGGTCAATGTCAGAGATCACAGGTGTGTCAAGATTTGGAATGATGAAACACAAGGCATTTAATAAGGATTCTTCTATGCTTGAAAACAACATCAAAGAAGAAAGAATGAGGCAAATTTGGTTTCCAATTGCAAGAAGAACAGTTCAATGGTTTGTGAATAGAGAAACAAGATCTCAGCAATCACAGAACAATAAACAGCAAGGAGAATTAGATGTATAG 1320 0.3917 MNPIVAIRISLFVLCALFSNGRAQGAPSSGDAVSNFQPSLAVVIGILGLMFSVTFILLMYAKFCQRGVLVPLGGGGGLENQPALGRSRSRFSGIDKTVIESLPFFRFSSLKGSKEGLECSVCLSKFEDVEILRLLPKCKHAFHIDCIDHWLEKHSSCPLCRQKVNPEDQTLFTYSNSLRRVLNSSGVAEESNLELFVQREEEQQHGSSRIFSIGSSFRKIMNKDVKEDELPIQKVKEEEDGDGDDENKAYHKHNHRITISDVVFKHRWSSVSSSDLMFLNSELLNDSSSSRFNNLETNHSDIVSNTRGAETDQIMNIKEEMERKISFENRVGALNKANINTNINNNSVPSTSDSATKQMNHHQGGEKRSMSEITGVSRFGMMKHKAFNKDSSMLENNIKEERMRQIWFPIARRTVQWFVNRETRSQQSQNNKQQGELDV* 440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g3334 439 PANTHER E3 UBIQUITIN-PROTEIN LIGASE ATL42 26 429 - -
Aev05g3334 439 SUPERFAMILY RING/U-box 98 167 - -
Aev05g3334 439 CDD RING-H2_PA-TM-RING 118 161 - -
Aev05g3334 439 MobiDBLite consensus disorder prediction 342 359 - -
Aev05g3334 439 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 93 170 IPR013083 -
Aev05g3334 439 ProSiteProfiles Zinc finger RING-type profile. 119 161 IPR001841 -
Aev05g3334 439 SMART ring_2 119 160 IPR001841 -
Aev05g3334 439 Pfam Ring finger domain 118 161 IPR001841 -
Aev05g3334 439 MobiDBLite consensus disorder prediction 342 369 - -
Aev05g3334 439 PANTHER E3 UBIQUITIN-PROTEIN LIGASE ATL42 26 429 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g3334 Aev-Chr5 32998106 32999425 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev05g3334 8 426 C3H Transcription Factor Family AT4G28890 48.438 4.97e-114 340
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g3334 K10664 - gmx:100803207 533.487
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev05g3334 05 32998106 32999425 Aev05g3334 05 32998106 32999425 ECH