Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g3332 ATGTCCAAGACAGAGTTTCATAAATATTGTAATGAGAATGGCATTCCTGGAGAGACAACAACTAGACAAGTTTTAAAGCATCTCTTGGAATTGGCCAAATTTGGTGCGGACAAGGTCCATTTTATTCAAGGGGTGGTTCCTAAATCTCTATTACCTGAATATCCATGGTTGGTTAGCATGGACCTTAGCAATGGGCAAGAAAATAAACCTATTCTTGTTACCAATATCTGCGACGATCCTCCTATTACACCTACCGGTTTTACCTACATCACATCTATGAAAGTTTCACGTGATGTGATAATTCAACCTAGCGCTGATGGATGCCAATGCAAAGGAAGTTGTGCTAACAAACGAACTTGTTCATGTGCTAGGCGTAATGGCTCTAGAGGGTTTCCATATGTTCAAGACAGATTAATCAAAGCTAGAGATATCATCTTTGAATGTGGTGCAACATGTGGTTGTAGAACTAATTGTGGCAACAAAGTTTCTCAAAAGGGTTTGAAGTTTCAACTGGAGGTTTATCGTACGCCCAAAAAAGGTTGGGGTGTTAGAACATGGGACTTGATTCATGCTGGTGAAGCAATCAGTGAATATCTTGGTGTGCTTTATAGAAGCGATGATTTAGATGATGTTACTAGCAATGACTACATCTTCAATATTGATTGCTTGCAAACTATCAATGAGCTTGATGGCCGAAAGAAACGAGAGCCTGGTGTGTTATATCCTACAAACCAGATTTCAACTCAAAAGGATGAGACATCAGAAAATGGAAGTGATGAATACTGCATAGAAGCTGCCTCTTTTGGTAATGTTTCTAGGTTTATCAATCACAGTTGTGAGCCTAACCTTTTCATTCAGTGCGTTCAGAGCCCTAACCTAAATATCAAGCAAGCTCGAATCATGATATTTGCTGCTCGAGACATACAGCCTTATGAAGAACTTACCTACGATTATGGTTACCAGCTTGATAGTGTTTGCGGCCCAGATGGTGAAATCAAACAGTTACCTTGCTATTGTGGAGCTCCTGCTTGTCGAAAGCGATTGTACTAA 1050 0.4 MSKTEFHKYCNENGIPGETTTRQVLKHLLELAKFGADKVHFIQGVVPKSLLPEYPWLVSMDLSNGQENKPILVTNICDDPPITPTGFTYITSMKVSRDVIIQPSADGCQCKGSCANKRTCSCARRNGSRGFPYVQDRLIKARDIIFECGATCGCRTNCGNKVSQKGLKFQLEVYRTPKKGWGVRTWDLIHAGEAISEYLGVLYRSDDLDDVTSNDYIFNIDCLQTINELDGRKKREPGVLYPTNQISTQKDETSENGSDEYCIEAASFGNVSRFINHSCEPNLFIQCVQSPNLNIKQARIMIFAARDIQPYEELTYDYGYQLDSVCGPDGEIKQLPCYCGAPACRKRLY* 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g3332 349 Gene3D SET domain 54 349 IPR046341 -
Aev05g3332 349 ProSiteProfiles SET domain profile. 169 319 IPR001214 GO:0005515
Aev05g3332 349 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE, H3 LYSINE-9 SPECIFIC SUVH4 7 348 - -
Aev05g3332 349 SMART set_7 169 325 IPR001214 GO:0005515
Aev05g3332 349 SMART preset_2 59 153 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Aev05g3332 349 Pfam SET domain 180 319 IPR001214 GO:0005515
Aev05g3332 349 Pfam Pre-SET motif 63 161 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Aev05g3332 349 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETMAR 7 348 - -
Aev05g3332 349 ProSiteProfiles Pre-SET domain profile. 106 166 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Aev05g3332 349 ProSiteProfiles Post-SET domain profile. 333 349 IPR003616 -
Aev05g3332 349 SMART PostSET_3 333 349 IPR003616 -
Aev05g3332 349 SUPERFAMILY SET domain 51 325 IPR046341 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g3332 Aev-Chr5 32976001 32980084 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev05g3332 5 349 EF-hand Containing Proteins AT5G13960 49.570 3.84e-116 343
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Aev05g3332 SET 1.4e-18 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g3332 K11420 - mtr:MTR_7g052480 390.193