Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g3329 ATGGCTGAACCACAAACACCAGAAACAGACACAACAAGAAGCACCGTTACTACTACCACCACCACTACACCAGCTTCACCGCCGTCAACACCGACCTCAAAACAACAACAACCCAATAATAACAAAAAGCGGCCCAGACAGGGCAAAGTTAACGGTATTAATGACAATACCAGCAGACACCCTGTCTACAGAGGGGTGAGAATGCGCACGTGGGGAAAATGGGTTTCCGAAATCAGGGAGCCACGGAAGAAGAGCAGAATCTGGCTCGGCACATTCGCCACTCCCGAGATGGCGGCGCGTGCACACGACGCCGCTGCTCTCACCATTAAGGGCTCTTCTGCAATCCTCAACTTCCCCGAACTCGCCGCCTCACTGCCCCGACCCGCTTCCAACTCCCCCCGTGACGTCCAGGCAGCCGCCGCCAAAGCGGCCGCAATGGACACTCCTCCTCAGGCATCTTCCTCATCTTCCTCCTCGGAGGAGGAGGAGTTGGGGGAGATAGTGGAGCTTCCAACGCTGGAGACGAGTTTAGAAATACCCGACCCGAACAGAGAGTTCGTGTTCTTCGACCCGCTTGATGGGTACTGGCCATGGTATCAACACGGAATTTATGATGATTATTATTATTGCGGTCTGCATCATGAAGAATCTGAATCTGATCACACTACTAATCTGGTTCCTCCTTCTTCTTCCTCTTCTTGCGGCATTCAAAGTTATTCTCTTTGGCAAAATTAA 735 0.5211 MAEPQTPETDTTRSTVTTTTTTTPASPPSTPTSKQQQPNNNKKRPRQGKVNGINDNTSRHPVYRGVRMRTWGKWVSEIREPRKKSRIWLGTFATPEMAARAHDAAALTIKGSSAILNFPELAASLPRPASNSPRDVQAAAAKAAAMDTPPQASSSSSSSEEEELGEIVELPTLETSLEIPDPNREFVFFDPLDGYWPWYQHGIYDDYYYCGLHHEESESDHTTNLVPPSSSSSCGIQSYSLWQN* 245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g3329 244 SUPERFAMILY DNA-binding domain 62 120 IPR016177 GO:0003677
Aev05g3329 244 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 14 220 - -
Aev05g3329 244 Gene3D AP2/ERF domain 62 120 IPR036955 GO:0003700|GO:0006355
Aev05g3329 244 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 3-LIKE 14 220 - -
Aev05g3329 244 PRINTS Ethylene responsive element binding protein signature 63 74 IPR001471 GO:0003700|GO:0006355
Aev05g3329 244 PRINTS Ethylene responsive element binding protein signature 85 101 IPR001471 GO:0003700|GO:0006355
Aev05g3329 244 ProSiteProfiles AP2/ERF domain profile. 62 119 IPR001471 GO:0003700|GO:0006355
Aev05g3329 244 MobiDBLite consensus disorder prediction 1 63 - -
Aev05g3329 244 Pfam AP2 domain 61 111 IPR001471 GO:0003700|GO:0006355
Aev05g3329 244 SMART rav1_2 62 125 IPR001471 GO:0003700|GO:0006355
Aev05g3329 244 MobiDBLite consensus disorder prediction 1 58 - -
Aev05g3329 244 MobiDBLite consensus disorder prediction 222 244 - -
Aev05g3329 244 MobiDBLite consensus disorder prediction 126 165 - -
Aev05g3329 244 CDD AP2 63 121 IPR001471 GO:0003700|GO:0006355
Aev05g3329 244 MobiDBLite consensus disorder prediction 219 244 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g3329 Aev-Chr5 32965129 32965863 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev05g3329 16 203 AP2-EREBP Transcription Factor Family AT5G11590 50.679 7.03e-59 184
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Aev05g3329 AP2 1.7e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g3329 K09286 - gmx:100804801 225.713
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev03g3257 03 30715925 30716767 Aev05g3329 05 32965129 32965863 PCT