Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g3318 ATGGGTTCTTGTGAAAAAAAGAAGAAGGATGATGATGAGGAGGCAGCATTAGAGAAGGGAGAGAAGAAATTGAAATCATGTTCTTCTTCTTCTTCTATAGGAATAGGAATAATATTGAGATATGCAGATTGGGTTGATGTTATGCTAATGGTAATGGGTGCTGTTGGGGCAATAGGAGATGGCATGTCCACTAACATTCTCCTCCTCTTCGCTAGCCGCATCATGAACAGCTTAGGATTCGCTCCTTATAATAACCAAAGTACTCCCAACAACAACAATTACATGGCTGAGGTTCAAAAGTGCAGCTTATATTTTGTCTACTTGGGATTAGCGGTCATGGTGGTCGCCTTCATGGAAGGGTATTGCTGGAGCAAAACAAGTGAGAGGCAGGTTCTGAGAATTCGTTACAAGTATTTGGAAGCTGTTCTCAGACAAGAAGTTGGCTTCTTTGATTCACAACAAGCAACCACTTCCCATATCACCACTAGCATCTCAAAGGACACTTCTCTCTTCCAAGAAGTTCTTAGTGAAAAGGTACCTCTATTTTTGATGCACTCATCATCATTCATATCTGGGGTAGTATTTGCAACATACTTCTCATGGAGGTTGGCTTTAGTAGCATTCCCAACACTTGTGTTACTCATAATCCCGGGCATGATCTATGGCAAATACCTCATCTACTTGTCAAAGTTGTCCATGAAGGAGTATGGAGAAGCAAACTCAATTGTGGAGCAAGGTCTTAGCTCAATCAAAACTATCTATTCATTCACTGCTGAGAAGAGAATCATGGTGAGATACTCAGGCATATTGGACAGGACTTCAAGGCTTGGAATCAAGCAAGGAATAGCAAAGGGCCTTGCTGTTGGGAGCACAGGCTTGTCTTTTGCAATATGGGCTTTTCTTGCTTGGTATGGAAGCCATTTGGTTATGTATAAAGGTGAGAGTGGTGGAAAGATCTATGCAGCTGGCATTTCATTCATAATGAGTGGACTATCCCTTGGAGTGGTACTTCCAGATTTGAAGTACTTCACAGAAGCATCAGTTTCAGCTTCAAGAATATTTGACATGATTGACCGAACACCAAAAATCGATGGAGAAGACACAAACAAAGGAATCATATTAGAGAGAATCACAGGAAAACTGGAATTTGAGCATGTAAAATTCACATACCCTTCAAGGCCAGACATGGTTGTTCTGAAGGACTTCAATCTGCAAGTGGAAGCAGGGAAAACAGTAGCACTTGTTGGTGCAAGTGGGAGTGGAAAATCCACAGCAATAGCTTTGGTTCAGAGGTTCTATGATGTTGATGAAGGTGTTGTGAGGGTTGATGGTGTTGACATAAAGAGCATTCAGTTGAAATGGGTCAGAGGCAAAATGGGACTTGTGAGTCAGGAACATGCACTTTTTGGGACTTCTATTAAGGACAATATTATGTTTGGCAAACCTGATGCTACCATGGATGAGGTTGTTGCTGCTGCTTCTGCTGCTAATGCTCATAATTTCATCAGGCAGCTTCCTGAAGGTTATGAAACAAAGATTGGAGAAAGAGGGGCACTTCTTTCAGGAGGACAAAAGCAGAGAATAGCCATAGCAAGAGCCATCATAAAGAATCCAGTGATTCTCCTACTTGATGAAGCAACCAGTGCCCTTGACTCTGAATCAGAATTACTTGTCCAGAATGCCCTTGATCAAGCCTCCATGGGGAGGACTACACTGGTTGTTGCACACAAGCTATCAACTATTAGAAATGCAGATCTCATAGCAGTAGTTAGTGGTGGATGCATAATTGAAACTGGAACACACAATGAGCTCATAAACTGTCCAAATGGCCACTATGCAAAGCTTGCAAAATTGCAGACACAGTTCAGCTTTGATGAGCAAGATCAAAACCAACAAGAATTAGGAGTTCTTTCTGCTGCAAGAAGCAGTACAGGTAGACCAAGCACTGCAAGATCAAGTCCTGCCATATTTCCAAAGTCACCATTGCCTTATGATGATAGCACCATCACAACTACCTCATCATCTCTTGTTTCACACCCTCCACCTTCATTTCCTAGGCTTCTTTCTCTGAGTGCTCCTGAATGGAAACAAGGTTTCATTGGAACTATCTCAGCTATAGCATTTGGATCTGTTCAACCACTATATGCCTTAACCATTGGTGGCATGATTTCTGCTTTTTTTGCCGAAAGCCATGAGGAAATGATTCATAGAATAAGGAACTATTCTTTGATTTTCTGTTCTCTTTCTTTGGCTTCCATCATTCTCAATCTCTTGCAGCACTATAATTTTGCTTATATGGGAGCAAAGTTAACCAAAAGGATTAGGCTGCGAATGCTGGAGAAGATCTTAACCTTTGAGACTGCTTGGTTTGATGAGGAACAGAACTCTAGTGGAGCACTTTGCTCAAGGTTGAGCCATGAGGCTTCCATGGTTAAGTCCCTCGTCGCGGACCGAATCTCTTTGCTGGTTCAAACAGCTTCTGCAGTCACAATTGCAATGATCATAGGGCTCGCCGTGGCGTGGAAGCTTGCTCTTGTTATGATAGCAGTGCAGCCACTCACAATACTTTGTTTTTACACAAGAAAAGTTTTGCTATCTACACTTTCAACAAAGTTTGTCAAGGCTCAGAACCAAAGCACACAGATTGCAGTTGAAGCAGTTTACAATCACAGAATTGTGACTTCATTCGGAAGCATCCCAAAAGTTCTGCTTCTATTTGATGAGGCTCAAGAGGCGCCGAGGAAGGAAGCGAGGAAGAAGGCTTGGCTAGCTGGCATTGGAATGGGATCTGCACAGTGCCTAACATTCATGTCATGGGCTTTGGATTTCTGGTATGGTGGCACATTGGTTCAGAAGAGGGAGATATCAGCAGGGGATGTGTTCAAAACATTCTTTGTGTTGGTTAGCACTGGTAAGGTCATAGCTGAAGCTGGAAGCATGACTTCTGACCTTGCAAAAAGCTCAACAGCAGTGGCATCTGTCTTTGAAATTCTTGACAGGCAATCACTGATTCCCAAGGCTGGGGATTGCACCAATGGAACCAAGTTGGAAAAGATGAGTGGGAAGATAGAGCTGAAGAATGTTGATTTTGCTTATCCAAGCAGGGCAGGGACACCGATACTGCGAAAATTTAGCTTGGAGGTGAAGCCAGGGAAAAGTGTTGGCCTAGTTGGGAAAAGTGGGTGTGGAAAATCAACAGTAATTGCATTGATTCAGAGGTTCTATGATGTTGAGAGAGGGTATGTGAAAGTGGACAATGTAGACATAAGGGAATTGGATATTCATTGGTATAGGCAGAACACAGCACTTGTTAGCCAAGAACCTGTTATATATTCTGGAAGCATACGTGATAACATTTTGTTTGGCAAGCAAGATGCATCAGAGAATGAAGTTGTTGAAGCTGCTAGAGCTGCAAATGCTCATGAATTCATATCATCATTGAAGGATGGATATGACACTGAATGTGGAGAAAGGGGAGTACAATTATCAGGAGGACAAAAGCAGAGAATAGCAATTGCAAGAGCCATAATTAGGAACCCCACAATATTGCTCCTAGATGAGGCAACAAGTGCATTGGATGTGCAATCTGAACAAGTTGTGCAGGAAGCACTTGATAGGATCATGGTAGGAAGAACCACCATTGTTGTGGCTCATAGGCTTAACACAATCAAGGAGCTTGACTCAATTGCCTATGTTTCAGAAGGAAAGGTTCTTGAGCAAGGAACCTATTCTCAGCTTAGGCATAAGAGAGGTGCCTTCTTCAACCTTGCTAGCCATCAAATGCAAACTTAG 3792 0.4251 MGSCEKKKKDDDEEAALEKGEKKLKSCSSSSSIGIGIILRYADWVDVMLMVMGAVGAIGDGMSTNILLLFASRIMNSLGFAPYNNQSTPNNNNYMAEVQKCSLYFVYLGLAVMVVAFMEGYCWSKTSERQVLRIRYKYLEAVLRQEVGFFDSQQATTSHITTSISKDTSLFQEVLSEKVPLFLMHSSSFISGVVFATYFSWRLALVAFPTLVLLIIPGMIYGKYLIYLSKLSMKEYGEANSIVEQGLSSIKTIYSFTAEKRIMVRYSGILDRTSRLGIKQGIAKGLAVGSTGLSFAIWAFLAWYGSHLVMYKGESGGKIYAAGISFIMSGLSLGVVLPDLKYFTEASVSASRIFDMIDRTPKIDGEDTNKGIILERITGKLEFEHVKFTYPSRPDMVVLKDFNLQVEAGKTVALVGASGSGKSTAIALVQRFYDVDEGVVRVDGVDIKSIQLKWVRGKMGLVSQEHALFGTSIKDNIMFGKPDATMDEVVAAASAANAHNFIRQLPEGYETKIGERGALLSGGQKQRIAIARAIIKNPVILLLDEATSALDSESELLVQNALDQASMGRTTLVVAHKLSTIRNADLIAVVSGGCIIETGTHNELINCPNGHYAKLAKLQTQFSFDEQDQNQQELGVLSAARSSTGRPSTARSSPAIFPKSPLPYDDSTITTTSSSLVSHPPPSFPRLLSLSAPEWKQGFIGTISAIAFGSVQPLYALTIGGMISAFFAESHEEMIHRIRNYSLIFCSLSLASIILNLLQHYNFAYMGAKLTKRIRLRMLEKILTFETAWFDEEQNSSGALCSRLSHEASMVKSLVADRISLLVQTASAVTIAMIIGLAVAWKLALVMIAVQPLTILCFYTRKVLLSTLSTKFVKAQNQSTQIAVEAVYNHRIVTSFGSIPKVLLLFDEAQEAPRKEARKKAWLAGIGMGSAQCLTFMSWALDFWYGGTLVQKREISAGDVFKTFFVLVSTGKVIAEAGSMTSDLAKSSTAVASVFEILDRQSLIPKAGDCTNGTKLEKMSGKIELKNVDFAYPSRAGTPILRKFSLEVKPGKSVGLVGKSGCGKSTVIALIQRFYDVERGYVKVDNVDIRELDIHWYRQNTALVSQEPVIYSGSIRDNILFGKQDASENEVVEAARAANAHEFISSLKDGYDTECGERGVQLSGGQKQRIAIARAIIRNPTILLLDEATSALDVQSEQVVQEALDRIMVGRTTIVVAHRLNTIKELDSIAYVSEGKVLEQGTYSQLRHKRGAFFNLASHQMQT* 1264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g3318 1263 Pfam ABC transporter 1041 1190 IPR003439 GO:0005524
Aev05g3318 1263 CDD ABC_6TM_Pgp_ABCB1_D2_like 688 1004 - -
Aev05g3318 1263 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1023 1259 IPR003439 GO:0005524
Aev05g3318 1263 MobiDBLite consensus disorder prediction 638 663 - -
Aev05g3318 1263 Gene3D ABC transporter type 1, transmembrane domain 666 1007 IPR036640 GO:0005524|GO:0016021
Aev05g3318 1263 PANTHER ABC TRANSPORTER B FAMILY MEMBER 8-RELATED 37 1260 - -
Aev05g3318 1263 Pfam ABC transporter 399 548 IPR003439 GO:0005524
Aev05g3318 1263 Gene3D - 371 620 IPR027417 -
Aev05g3318 1263 ProSitePatterns ABC transporters family signature. 1162 1176 IPR017871 GO:0005524
Aev05g3318 1263 Pfam ABC transporter transmembrane region 699 969 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Aev05g3318 1263 Pfam ABC transporter transmembrane region 75 325 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Aev05g3318 1263 CDD ABC_6TM_Pgp_ABCB1_D1_like 50 353 - -
Aev05g3318 1263 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 699 986 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Aev05g3318 1263 SUPERFAMILY ABC transporter transmembrane region 682 999 IPR036640 GO:0005524|GO:0016021
Aev05g3318 1263 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 51 345 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Aev05g3318 1263 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1014 1261 IPR027417 -
Aev05g3318 1263 SMART AAA_5 1050 1242 IPR003593 -
Aev05g3318 1263 SMART AAA_5 408 600 IPR003593 -
Aev05g3318 1263 CDD ABC_MTABC3_MDL1_MDL2 382 619 - -
Aev05g3318 1263 CDD ABC_MTABC3_MDL1_MDL2 1023 1260 - -
Aev05g3318 1263 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 371 619 IPR027417 -
Aev05g3318 1263 SUPERFAMILY ABC transporter transmembrane region 38 364 IPR036640 GO:0005524|GO:0016021
Aev05g3318 1263 MobiDBLite consensus disorder prediction 638 655 - -
Aev05g3318 1263 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 381 617 IPR003439 GO:0005524
Aev05g3318 1263 PANTHER ATP-BINDING CASSETTE SUB-FAMILY B 37 1260 IPR039421 -
Aev05g3318 1263 Gene3D ABC transporter type 1, transmembrane domain 38 626 IPR036640 GO:0005524|GO:0016021
Aev05g3318 1263 Gene3D - 1013 1263 IPR027417 -
Aev05g3318 1263 ProSitePatterns ABC transporters family signature. 520 534 IPR017871 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g3318 Aev-Chr5 32849302 32858118 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev05g3318 38 1253 Calmodulin-binding Proteins AT2G36910 42.857 0.0 956
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g3318 K05658 - gmx:100801088 2066.97
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev05g3318 05 32849302 32858118 Aev05g3318 05 32849302 32858118 ECH