Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g3312 ATGAACAACTACGTTGGCAAGATTCCTGATGATATTGACAGGTTGGCCAATTTGCAGTATCTGAACCTTGGTTCAACCAACTTCAGTGGTGACATTCCTGCTAGCATTGGAAGGTTGAAGGAACTGAGAGTGCTTCGCCTTCAGTATTGTCTGTTTAATGGTACTGTCCCTGATGAGATTGGAAACTTGTCCAATCTTGAGTTCTTGGATTTGTCCACTAACACCATGTTTCCTCCTTGGAGTTTGCCATCAAGCTGGACCAAGTTGAATAAGTTGAAGGTCTTTTATGTGTACACATGCAACTTGGTTGGGGAGATTCCTCAAACCATTGGAGAAATGGTGGCTTTGGAGAAATTGGATTTGTCACAAAACGGCTTAACTGGACAGATTCCAAGCAGTTTGTTCATGCTGAAGAATCTAAGCATATTGTACCTTTGGAGCAACAGACTTTCCGGGGAGATACCTGCTGTGGTTGAAGCATTAAATTTGACCTTCATTGATTTATCAGAGAACAGCCTTACCGGGAAAGTACCGGAAGATTTCGGAAAGCTCCAAAAGTTAACTGATTTGGGGTTGTCTATGAATCAGTTGTCTGGGGTGATGCCGGAAAGCCTAGGCCGTCTTCCATCTCTTGTAGATGTTCGTGCATTTATGAACAATTTATCAGGCACTCTTCCTCCTGACTTTGGCCGCTACTCGAAGCTTGAAGTCTTCGAGGTCTCATCTAATAATTTAACAGGGAATTTACCAGAGAACTTGTGCTTTCATGGTGAGTTGACTAATATGACTGTTTTTGACAATAATCTCAGTGGGGAGTTGCCAGAATCACTAGGAAAATGCAGCAGCCTCCAGGATCTGAAAATTCACAACAATGAGTTTTCTGGTAACATTCCTAGTGGCCTTTGGACATCTCCCAATTTGGTTAACTTCAAGCTAAGCCATAACAAGTTCAGCGGCGAGCTCCCCGAAAGATTGTCTTTGAACATTTCCCACTTTAATATAAGTAACAATCAGTTTTCTGGTAGAATTCCTGCTGAATCTTCCGTCCACTCTAAGCGTGGTTTGGGTACGAATCTTGGGAATCCTTCTTTGGTGGGCGATCTCCATGCAAATTCTCAGTCTCTGCAGCTTCATGATCAAGAACATGAAGTCTTATTGAAGATAAAACAGTACCTGCAAGATCCACCTTTCCTTAGTCACTGGACTCAATCAAACTCTTCTTCTCATTGTTCTTGGGAAGAGATCACTTGCACCAATGGTTCTGTCACTGGACTTGCTCTAGTGGATGTTAACATCAACCAAACAATACCAAATTTCTTATGTGACCTCAAAAACCTCACACATGTTGATTTCAACCTCAACTTCATTCCTGGGGGGTTTCCAACTTCTCTATACAATTGTTCAAAACTTGAGTACCTTGACCTTTCAATGAACAATTTTGTTGGTATTGTACCTGATGATATTGACAGGTTGTCCAATTTGCAGTATCTTAATATTAGTTACACCAACTTCACTGGTGACATTCCTGCCAGTGTTGGAAGTTTGAAGGAACTGAGGTACCTTGCATTTCAAGATTGCCTATTCAATGGAACTTTCCCTGATGAGATTGGAAACTTGTCCAATCTTGAAACCTTGGATTTGTCAGGGAACCCCATCCTCCCTCCTTCAAGGTTGCCATCAAGTTGGACAAAGTTGAATAAACTGAAAATCTTTTATATGTATCAGTGCAATTTGATTGGGGAAATCCCTGAAACCATTGGAGATATGGTTGCTCTGGAGGAGCTTGATTTATCACAGAACAGTTTAACTGGACAAATTCCAAGTGGTTTGTTTCAGCTGAAGAATCTGAGCATGGTGCGCCTTTGGAGGAATGGTCTCTCAGGGGAGATATCTTCTGCTGTTGAAGCATTAAATTTGACCATCATTGATCTTACAAATAATAGAATCGAAGGGAAAATACCAGATGATTTCGGAAAGCTCCAGAAGTTAACAAGCTTGAGATTGTCTATAAACAACTTGTCAGATGTGATACCAGAAAGCTTAGGCAGTCTTCCATCTCTAGTAGATTTTCGTGTCTTCAGGAACAACTTATCAGGTACTCTTCCTCCCGAATTCGGCCGCTATTCAAAGCTTGAAGTCTTTCATACTGCATCTAATAATTTATTTGGAAGGCTACCAGAGAACATATGCTATTATGGTTCATTGATTAATTTGACTGTCTATGAAAACAATCTAAATGGAGAGTTGCCAGAGTCATTAGGAAACTGCAGTACCCTGAAGGACTTGAAGATTTACAGCAATGAGTTTTCTGGTAACATTCCTAGTGGCCTTTGGACATTTCCCAATCTGATCAATTTCATGGTGAGCAATAACAGGTTCACTGGTGAGCTTCCTGAGAGGTTGTCTTCGAGTATTTCGAGCTTCCAGATAAGCTACAATCAGTTTTCTGGTAGAATTCCATCTGGAGTATCATCTTGGACCAATGTGGTAGTGTTTGATGCAAGTAGTAACTTCTTAAATGGAAGCATTCCACAAGAGTTAACTGCACTTCCCAAGCTTACAAGGCTTTTGCTTGATCAGAACCATCTCGCCGGGCCACTTCCATTGGAGATAGTATCATGGAAGTCACTTGTAACTCTAAATGTGAGCAAAAACCAACTCTCAGGACAAATCCCTGATGCAATTGGTCGTTTACCGGCACTCGGTGTTCTTGACTTGTCAGAAAACCAATTGTCTGGCCAAATTCCTCAACTTCCAAGTACAAGACTCAACATTCTCAACCTATCCTCCAATAACTTGACTGGCAGGGTTCCAAGTGAATTTGAGAATTCTGTTTATGATACCAGCTTTTTGAACAATCCTGGTCTATGTGCTGATACACCAGCTCTGAACATTGGCTTGTGCAATTCTGGCTCTAAGAGTTCAAGCAAGGACTCATCTTGGTCTCCTGCATTGATTATAAGCCTTTCTGTAGTGGCTTCCTTACTCGCAATTTTTATTTCATTCTTGATTTTCAGACTCAGAAGGAAAAGAAAGCAAGTGCTGGATAAGTCATGGAAGCTCACTTCCTTCCAAAGGTTGAGTTTCACTGAATCGGACATAGTTTCTTCATTGACAGAACACAACATCATTGGCAGTGGTGGATATGGTACCGTATACCGTGTTGACATTGATGGTTTAGGCTATGTTGCTGTGAAAAGGATCTGTGATAATAGTAGAAAGCTAAACAAGAACCTTGAGAGCTCATTTGTCGCTGAAGTGAAAATATTGAGCAGCATTCGCCATAGGAACATTGTGAGGTTGTTGTGCTGCATCCACAATGATGAAACTATGCTTCTTGTATATGAGTATCTGGAGAATAGAAGCCTTGACAAGTGGCTGCACAAGAAGATCAAGTCATCATCTGTTTCAGGTTCAGTACACCATGTGGCACTTAATTGGCCGAACAGGATGCAAATAGCCATTGGTGTTGCTCAAGGTTTGAGCTACATGCACCATGATTGCTCACCACCTGTTGTTCATAGAGATGTGAAGACAAGCAACATACTCTTGGACTCTCAATTCAATGCAAAAGTTGCTGATTTTGGTCTTGCAAGGATGTTGATCAAGCCAGGGGAACTTGCCACTGTGTCAACTGTGGTTGGCTCTTTTGGATATGTTGCTCCAGAATATATTCAGACAACAAGAGTCAGTGAAAAGATTGATGTCTTCAGCTTTGGGGTTATCCTGTTAGAGATGACAACAGGCAAAGAAGCTCACTATGGAGATGAACACTCATCACTTGCAGAGTGGGCGTGGCGCCGCTTTCAGGCAGGAAGCAGCATAGAAGAACTGCTAGACAAAGAAGTGATGGAACCAAACTACATGGATGAGATGTGTCAAGCTTTCAAACTTGGTGTTATGTGTACTGCAAAACTTCCTTCTGCTAGGCCTACAATGAAGGAGGCCCTGCAAATATTGCTTCGCAGTGGAGAAGCATTTGCTTTTGCTGAGAGCAATGTTATTGGACACTATGATTTTGTTCCTCTTCTTAGAGAATCAAAAAGGGAGCATAGGTTGGATATTGATGGTGACACCTAG 4080 0.4159 MNNYVGKIPDDIDRLANLQYLNLGSTNFSGDIPASIGRLKELRVLRLQYCLFNGTVPDEIGNLSNLEFLDLSTNTMFPPWSLPSSWTKLNKLKVFYVYTCNLVGEIPQTIGEMVALEKLDLSQNGLTGQIPSSLFMLKNLSILYLWSNRLSGEIPAVVEALNLTFIDLSENSLTGKVPEDFGKLQKLTDLGLSMNQLSGVMPESLGRLPSLVDVRAFMNNLSGTLPPDFGRYSKLEVFEVSSNNLTGNLPENLCFHGELTNMTVFDNNLSGELPESLGKCSSLQDLKIHNNEFSGNIPSGLWTSPNLVNFKLSHNKFSGELPERLSLNISHFNISNNQFSGRIPAESSVHSKRGLGTNLGNPSLVGDLHANSQSLQLHDQEHEVLLKIKQYLQDPPFLSHWTQSNSSSHCSWEEITCTNGSVTGLALVDVNINQTIPNFLCDLKNLTHVDFNLNFIPGGFPTSLYNCSKLEYLDLSMNNFVGIVPDDIDRLSNLQYLNISYTNFTGDIPASVGSLKELRYLAFQDCLFNGTFPDEIGNLSNLETLDLSGNPILPPSRLPSSWTKLNKLKIFYMYQCNLIGEIPETIGDMVALEELDLSQNSLTGQIPSGLFQLKNLSMVRLWRNGLSGEISSAVEALNLTIIDLTNNRIEGKIPDDFGKLQKLTSLRLSINNLSDVIPESLGSLPSLVDFRVFRNNLSGTLPPEFGRYSKLEVFHTASNNLFGRLPENICYYGSLINLTVYENNLNGELPESLGNCSTLKDLKIYSNEFSGNIPSGLWTFPNLINFMVSNNRFTGELPERLSSSISSFQISYNQFSGRIPSGVSSWTNVVVFDASSNFLNGSIPQELTALPKLTRLLLDQNHLAGPLPLEIVSWKSLVTLNVSKNQLSGQIPDAIGRLPALGVLDLSENQLSGQIPQLPSTRLNILNLSSNNLTGRVPSEFENSVYDTSFLNNPGLCADTPALNIGLCNSGSKSSSKDSSWSPALIISLSVVASLLAIFISFLIFRLRRKRKQVLDKSWKLTSFQRLSFTESDIVSSLTEHNIIGSGGYGTVYRVDIDGLGYVAVKRICDNSRKLNKNLESSFVAEVKILSSIRHRNIVRLLCCIHNDETMLLVYEYLENRSLDKWLHKKIKSSSVSGSVHHVALNWPNRMQIAIGVAQGLSYMHHDCSPPVVHRDVKTSNILLDSQFNAKVADFGLARMLIKPGELATVSTVVGSFGYVAPEYIQTTRVSEKIDVFSFGVILLEMTTGKEAHYGDEHSSLAEWAWRRFQAGSSIEELLDKEVMEPNYMDEMCQAFKLGVMCTAKLPSARPTMKEALQILLRSGEAFAFAESNVIGHYDFVPLLRESKREHRLDIDGDT* 1360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g3312 1359 SMART LRR_sd22_2 137 163 - -
Aev05g3312 1359 SMART LRR_sd22_2 443 475 - -
Aev05g3312 1359 SMART LRR_sd22_2 589 618 - -
Aev05g3312 1359 SMART LRR_sd22_2 636 657 - -
Aev05g3312 1359 SMART LRR_sd22_2 539 567 - -
Aev05g3312 1359 Gene3D Ribonuclease Inhibitor 1 79 IPR032675 -
Aev05g3312 1359 SMART LRR_typ_2 589 613 IPR003591 -
Aev05g3312 1359 SMART LRR_typ_2 184 207 IPR003591 -
Aev05g3312 1359 SMART LRR_typ_2 660 683 IPR003591 -
Aev05g3312 1359 SMART LRR_typ_2 63 89 IPR003591 -
Aev05g3312 1359 SMART LRR_typ_2 113 137 IPR003591 -
Aev05g3312 1359 SMART LRR_typ_2 15 39 IPR003591 -
Aev05g3312 1359 SMART LRR_typ_2 539 565 IPR003591 -
Aev05g3312 1359 SMART LRR_typ_2 850 874 IPR003591 -
Aev05g3312 1359 SMART LRR_typ_2 898 921 IPR003591 -
Aev05g3312 1359 PRINTS Leucine-rich repeat signature 592 605 - -
Aev05g3312 1359 PRINTS Leucine-rich repeat signature 898 911 - -
Aev05g3312 1359 Pfam Protein kinase domain 1040 1318 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aev05g3312 1359 Pfam Leucine rich repeat N-terminal domain 379 417 IPR013210 -
Aev05g3312 1359 SMART serkin_6 1038 1321 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aev05g3312 1359 Gene3D Ribonuclease Inhibitor 700 975 IPR032675 -
Aev05g3312 1359 Gene3D Ribonuclease Inhibitor 80 376 IPR032675 -
Aev05g3312 1359 CDD STKc_IRAK 1044 1322 - -
Aev05g3312 1359 Pfam Leucine Rich Repeat 592 609 IPR001611 GO:0005515
Aev05g3312 1359 Pfam Leucine Rich Repeat 541 558 IPR001611 GO:0005515
Aev05g3312 1359 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 369 1352 - -
Aev05g3312 1359 ProSiteProfiles Protein kinase domain profile. 1038 1328 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aev05g3312 1359 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 1 348 - -
Aev05g3312 1359 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 369 1352 - -
Aev05g3312 1359 Gene3D Ribonuclease Inhibitor 377 556 IPR032675 -
Aev05g3312 1359 Gene3D Transferase(Phosphotransferase) domain 1 1118 1332 - -
Aev05g3312 1359 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1172 1184 IPR008271 GO:0004672|GO:0006468
Aev05g3312 1359 Pfam Leucine rich repeat 139 197 IPR001611 GO:0005515
Aev05g3312 1359 Pfam Leucine rich repeat 445 503 IPR001611 GO:0005515
Aev05g3312 1359 Pfam Leucine rich repeat 638 697 IPR001611 GO:0005515
Aev05g3312 1359 ProSitePatterns Protein kinases ATP-binding region signature. 1044 1066 IPR017441 GO:0005524
Aev05g3312 1359 SUPERFAMILY L domain-like 388 714 - -
Aev05g3312 1359 SUPERFAMILY RNI-like 638 941 - -
Aev05g3312 1359 Gene3D Phosphorylase Kinase; domain 1 1016 1117 - -
Aev05g3312 1359 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 1 348 - -
Aev05g3312 1359 Gene3D Ribonuclease Inhibitor 557 699 IPR032675 -
Aev05g3312 1359 SUPERFAMILY RNI-like 2 344 - -
Aev05g3312 1359 SUPERFAMILY Protein kinase-like (PK-like) 1029 1320 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g3312 Aev-Chr5 32782321 32791420 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev05g3312 248 801 Receptor kinase-like Gene Family AT5G25930 31.338 5.76e-57 213
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Aev05g3312 Pkinase 3.3e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g3312 - - gmx:100798963 1440.25
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev05g3312 05 32782321 32791420 Aev05g3312 05 32782321 32791420 ECH